KEGG   Ziziphus jujuba (Chinese jujube): 107423821
Entry
107423821         CDS       T04794                                 
Name
(RefSeq) DNA repair protein RAD51 homolog
  KO
K04482  DNA repair protein RAD51
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    107423821
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zju04131]
    107423821
   04121 Ubiquitin system [BR:zju04121]
    107423821
   03400 DNA repair and recombination proteins [BR:zju03400]
    107423821
Membrane trafficking [BR:zju04131]
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    107423821
Ubiquitin system [BR:zju04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   BRCC complex
    107423821
DNA repair and recombination proteins [BR:zju03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA complex
     107423821
    RecA family proteins
     107423821
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     107423821
SSDB
Motif
Pfam: Rad51 RecA AAA_25 HHH_5 ATPase AAA_22 DnaB_C
Other DBs
NCBI-GeneID: 107423821
NCBI-ProteinID: XP_015888943
UniProt: A0A6P4A213
Position
7:complement(join(2005652..2005775,2005879..2006000,2006226..2006355,2006469..2006582,2006665..2006759,2007063..2007154,2007302..2007412,2007530..2007674,2008246..2008335))
AA seq 340 aa
MEQQRNMKMVQEQEEHEEIQHGPFPVEQLQASGIAAIDVKKLRDSGLCTVESVAYSPRKD
LLQIKGISEAKVDKIIEAASKLVPLGFTSASQLHAQRLEIIQITSGSRELDKVLEGGIET
GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG
LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS
ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTR
LALRKGRGEERICKVISSPCLAEADARFQISAEGVTDVKD
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggagcagcagaggaacatgaaaatggtccaagaacaagaagaacatgaagagatccag
catggccctttccctgttgaacagcttcaggcgtcaggtatcgctgcaattgacgtaaag
aagctgagagattcgggtctctgtacagttgaatctgttgcttactctccaaggaaagat
cttttgcaaatcaaaggaatcagcgaagccaaagtagacaagatcatcgaagcagcctcc
aaattggtgcctttgggtttcactagtgcaagccaactccacgcccagaggcttgaaatc
attcaaataacatctggatcaagggaacttgacaaggttttggagggaggaatagaaacg
ggatctatcaccgagatatatggtgaatttcgctctggaaagactcagctctgtcataca
ctctgtgtcacttgccaacttccattagaccaaggaggtggtgaggggaaagcaatgtac
attgatgccgagggcacgttcagaccacagagactcttacagatagcagacaggtttgga
ttgaatggtgctgatgtcttggagaatgttgcctatgctagagcttataacactgaccat
cagtcaagactgctgcttgaagcagcttcaatgatggtggaaacaaggtttgctctcatg
atagtagacagtgctactgctctctatagaactgatttttctgggaggggagaactttcg
gctcgacaaatgcatcttgcgaagttcctcaggagtcttcagaagctagcagatgagttt
ggcgtggctgttgtaattacaaaccaagttgttgcgcaagttgatggttctgcaatcttt
gctgggcctcaaattaagccaattggtggaaacatcatggctcatgcttcaacaacaagg
cttgctctccggaagggcagaggggaagaacgcatttgcaaggtaataagttctccttgt
ttagctgaagctgacgctcggtttcaaatttctgctgaaggtgttacagatgtcaaggac
tga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (21)   

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