KEGG   Ziziphus jujuba (Chinese jujube): 107427300
Entry
107427300         CDS       T04794                                 
Name
(RefSeq) uncharacterized protein LOC107427300
  KO
K14568  rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    107427300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:zju03009]
    107427300
Enzymes [BR:zju01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.260  rRNA small subunit pseudouridine methyltransferase Nep1
     107427300
Ribosome biogenesis [BR:zju03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    107427300
SSDB
Motif
Pfam: EMG1
Other DBs
NCBI-GeneID: 107427300
NCBI-ProteinID: XP_060667209
Position
9:join(21103337..21103380,21103475..21103574,21104654..21104798,21104959..21105069,21105163..21105215,21105311..21105400)
AA seq 180 aa
MDVPARMLGSKRVGLQNPKWTISHADGLGSYILGTKQSLDLDTPIIIVALRKIFDSQLCM
AGRIEAVYIKIDEGILVKAEPNVNIPESLEKFCAMMSQLLQKLSIKGKGKGGKLLRVVKN
PVTQYLPVNPLKIGLSYSSQNKADLQDYVGAVGAMAHGSFDSDYTDDLIAGCASYKFCSS
NT seq 543 nt   +upstreamnt  +downstreamnt
atggatgtcccagcgaggatgctaggctctaaaagggttggattgcagaatccaaagtgg
acaatatctcatgcggatggactgggcagttacatcttgggcaccaagcaaagccttgat
cttgatactccaattatcatagttgctctccgtaaaatttttgattcccagctttgtatg
gctgggagaatagaggccgtgtacataaaaatcgatgaagggattctcgttaaagctgaa
ccaaatgttaatatacctgaatcactggagaagttttgtgctatgatgtctcaactatta
caaaaattgagcatcaaaggcaaaggtaaaggtggaaaacttttgcgtgtggttaagaac
cccgtaactcagtacttacctgtcaatccccttaagataggcctttcttatagttcacag
aacaaggctgacttacaagattatgttggtgctgttggtgcaatggctcatgggagcttt
gatagcgactacacagatgatttaatagcaggttgtgcctcttataaattttgttcttct
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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