KEGG   Zea mays (maize): 100193501Help
Entry
100193501         CDS       T01088                                 

Gene name
CHC2
Definition
(RefSeq) uncharacterized protein LOC100193501
  KO
K04646  clathrin heavy chain
Organism
zma  Zea mays (maize)
Pathway
zma04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:zma00001]
 Cellular Processes
  Transport and catabolism
   04144 Endocytosis
    100193501 (CHC2)
Membrane trafficking [BR:zma04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    100193501 (CHC2)
Exosome [BR:zma04147]
 Exosomal proteins
  Proteins found in most exosomes
   100193501 (CHC2)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link
Motif
Other DBs
NCBI-GeneID: 100193501
NCBI-ProteinID: NP_001345687
Position
2
AA seq 1710 aa AA seqDB search
MAAANAPIAMREALTLTSLGIAPQFVTFTHVTMESEKYICVRETSPQNSVVIIDMAMPMQ
PLRRPITADSALMNPNTRILALKAQIPGTTQDHLQIFNIEAKTKIKSHQMPEQVVFWKWI
TPKLLGLVTQTSVYHWSIEGDSEPTKMFDRTANLANNQIINYRCDPAEKWLVLIGIAPGA
PERPQLVKGNMQLFSVDQQRSQALEAHAASFATFKVVGNENPSTLICFASKTTNAGQITS
KLHVIELGAQPGKPGFSKKQADLFFPPDFQDDFPVAMQVSQKYGLIYVITKLGLLFVYDL
ETAAAVYRNRISPDPIFLTAESSSTGGFYAINRRGQVLHATVNDATVVPFVSGQLNNLEL
AVNLAKRANLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGLLRTPETVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTYPNVADAILANGMFSHYDRPRIAQLCEKAGLYLRALQHYAELPDIKRAIVNTHAI
EPQALVEFFGTLSREWALECMKDLLLVNLRGNLQIVVQAAKEYSEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSSSEDPEIHFKYIEAAARTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPFYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELIIVTNKNSLFKLQARY
VVERMDGDLWDKVLQPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYVNRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVDVLLDNIRSIERAEEFAFRVEEDAVWSQVAKAQLREGLVSEAIE
SFIRADDAAHFLDVIRAAEEANVYNDLVKYLLMVRQKAREPKVDGELIFAYAKIDRLSDI
EEFILMPNVANLQNVGDRLYDEELYEAAKIIYAFISNWAKLAVTLVKLKQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFSELIALMESG
LGLERAHMGIFTELGVLYARYRSEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAVTTIMNHSPDAWDHMQFKDVCVKVANVELYYKAVHFYLQEHPDLINDMLNVL
ALRLDHTRVVDIMRKAGQLHLVKPYMVAVQSNNVSAVNEALNELYVEEEDYERLRESVDM
HDNFDQIGLAQKLEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNMYKDCMETCSQSGD
RELSEDLLVYFIEQGKKECFASCLFICYDLIRPDVALELAWMNNMLDFAFPYLLQFIREY
TSKVDDLVKDRIESQNEERVKEKEEKDLVAQQNMYAQLLPLALPAPPMPGMGGPPPPMGG
MGMPPMGGMGMPPMGPGPMPAFGMPAMGSY
NT seq 5133 nt NT seq  +upstreamnt  +downstreamnt
atggcggcggccaacgctcccatcgccatgcgcgaggcgctcacgctcaccagcctgggc
atcgcgccgcagttcgtcaccttcacccacgtcaccatggagtcggagaagtacatctgc
gtccgcgagacctccccgcaaaacagtgtcgtcatcatcgacatggccatgcccatgcag
ccgctccgacggcccatcaccgccgactccgccctcatgaaccccaacaccaggatcctc
gccctgaaagcccaaatacctggaacaacacaggatcaccttcaaatatttaacattgag
gctaagactaagatcaagtctcaccagatgccggagcaggtcgtattctggaaatggatc
actcccaaactgttgggtttggtgacacaaacatcagtttaccactggtcgattgaaggt
gattctgagcccaccaagatgtttgataggacggctaatctggcaaacaatcagatcatc
aactatcgatgtgacccagcggagaagtggcttgtacttattggaattgcacctggagcc
ccagagaggccacaactggtgaagggaaatatgcaacttttctctgttgatcaacaacgt
agccaggcacttgaagcccatgcagcgtcttttgcaacatttaaggttgttggtaatgag
aatccatcaacccttatttgtttcgcctcaaagacaactaatgctggacagatcacttca
aagttgcatgttattgaactgggtgcacagccagggaaacctggtttttctaagaaacaa
gccgacctcttcttccccccagatttccaggatgattttcctgtagctatgcaggtttca
caaaagtatgggcttatctatgtaattactaagcttggccttttgtttgtatatgacttg
gaaactgctgcggcagtttacagaaatagaatcagtccagaccctatattcttgacggca
gaatcttcctctactggtggattttatgccatcaacagaagggggcaggttttacatgcc
acagttaatgatgcaactgttgtaccttttgtcagtggccaattaaacaaccttgagctt
gctgtgaatctggccaagagagctaacctccctggtgctgagaacttggttgtgcaaaga
ttccaggaattgtttgcacagacaaaatacaaggaagcagctgagcttgctgcagaatct
ccccagggtctcctgaggacgcctgagaccgtggcaaaatttcagagtgttcctgtgcaa
gctgggcaaacacccccactcttgcagtactttggcacattgctaactcgagggaagctc
aatgcctttgagtcgcttgagctatctcgacttgttgtcaatcagaacaaaaagaatctt
ctggaaaattggttggcagaagacaagctggagtgtagtgaagaactaggagatcttgtc
aagactgtggacaatgatcttgcactgaaaatttacataaaggctagggcaacccctaaa
gttgttgctgcttttgctgaaaggagggagtttgacaagatactgatatactcaaagcag
gttgggtacactccagattatctcttcctcctccagaccatcttgcgtacagatccacag
ggagctgtgaactttgctcttatgatgtcacaaatggagggaggctgcccagtagattat
aatacaataactgatcttttccttcagagaaatatgataagggaggcaacagcttttctg
ttggatgttctgaaaccaaacttgccagagcatgcttttcttcaaaccaaggttttggag
ataaacttagtgacttacccaaatgttgctgatgccattcttgctaatggtatgttcagt
cattacgatcgccctcgtattgctcagctgtgtgaaaaggctggtttgtacttgcgagcc
ctccagcattacgcagagttgcctgatatcaagcgtgccattgtaaatacccatgccatt
gaaccacaggcacttgttgagttttttggcaccttgtcaagagagtgggctttggaatgc
atgaaagaccttctacttgttaatctgaggggaaatcttcagattgttgtgcaggctgcg
aaagagtactctgaacagctaggggttgatgcttgtatcaaattatttgagcaattcaaa
tcttatgagggcctttactttttcttggggtcttatctgagctccagtgaggacccagag
atccatttcaagtacatagaagcagcagcaaggactggacaaatcaaagaagttgaacgt
gtaaccagggagtcaaacttctatgatgctgagaagacaaagaactttttgatggaagca
aaactacctgatgcccgtccactgattaatgtttgtgaccgctttggttttgtgccagat
ctcactcactatctgtacacaaacaacatgcttcgatatatcgaaggctatgttcaaaag
gtgaatcccgggaacgctcctttggtagtgggccagttacttgatgatgaatgccctgaa
gattttatcaagggcttgatcctctctgttcgttctctccttcctgttgaaccactggtt
gatgaatgtgagaagaggaatcgcctacgtttgctcactcaattcctggagcacttagtg
agtgaaggtagccaagatgtgcatgtccataatgctcttggtaaaatcatcattgacagc
aacaacaatcctgagcatttccttactaccaacccattttacgactctcgtgttgtgggt
aaatattgtgaaaagcgggatcctacacttgctgttgttgcttacagacgtggacagtgt
gatgatgaacttattattgtcaccaacaaaaactcattattcaagctgcaagctaggtat
gtggttgagagaatggatggtgatctgtgggataaagttcttcagcctgagaatgaatat
agaaggcaactcattgaccaagtggtttccactgcattacctgagagcaagagccctgag
caagtgtctgctgctgttaaggctttcatgactgctgacctgccacatgaactgattgag
cttcttgaaaaaattgttcttcaaaattctgctttcagtggaaatttcaatctgcaaaac
ctgctcatcttgactgctatcaaggcagatccatccagagtcatggattatgtcaacaga
cttgataactttgatgggcctgctgttggagaagttgctgttgaagcacaactgtatgag
gaggcttttgctatattcaagaagttcaacttaaatgtgcaggctgtcgatgttctcttg
gacaacatccggagcatagaaagagctgaggaatttgctttccgtgttgaagaagatgct
gtttggagtcaggttgccaaagcccagttacgtgaaggtcttgtcagtgaagcaattgag
tccttcattcgtgcagatgatgctgcacacttccttgatgtcatccgtgctgcggaggaa
gctaatgtgtacaatgatttagtgaagtaccttctgatggtaaggcaaaaggcacgggaa
cccaaagtcgatggagaactcatctttgcatatgctaagattgacaggctcagtgatatt
gaggaattcattcttatgccaaatgttgccaaccttcaaaatgttggcgaccgtctgtat
gatgaagaactatatgaagctgcaaaaatcatctatgctttcatttcaaactgggctaag
ctggctgttaccctggttaagctgaagcagttccaaggtgctgtggatgctgctcgcaag
gctaacagtgccaaaacatggaaggaggtctgctttgcttgtgttgacgccgaggagttc
cgtcttgcacaaatttgtggtctcaatattattattcaggttgatgacttggaagaagtc
agtgagtactaccagaatagaggatgcttcagtgaacttattgctctcatggagagtggt
cttggacttgaacgtgcacacatgggcatcttcacagaattgggagttctgtatgctaga
taccgctctgagaagcttatggagcacatcaaacttttctccacccgtctcaatattcct
aagcttattcgagcctgtgatgaacagcagcactggaaagaacttacctacctgtacata
cagtatgatgaatttgacaatgcagtcaccactattatgaaccactctcctgatgcatgg
gatcatatgcagttcaaggatgtttgcgttaaagttgcaaacgttgagctatattacaag
gcagttcacttctatttgcaagagcatcctgatctcatcaatgatatgctgaatgtgctt
gcacttcgtttagatcataccagagttgtagacataatgcgcaaggctggtcaattgcat
cttgtgaaaccatatatggttgcagttcagagtaataatgtctctgctgtgaatgaagcc
ttgaatgagctttatgttgaagaggaagactatgagagactccgtgaatcagttgacatg
catgacaactttgaccaaataggtcttgcccagaagctggagaagcatgaattgcttgag
atgaggaggattgctgcctacatttacaagaaggctggcaggtggaagcaatccattgct
ctatcaaagaaagataacatgtacaaggattgtatggagacatgctcacaatctggtgac
cgtgaactgtcagaggacttgcttgtgtattttatcgagcagggtaagaaagaatgcttt
gcttcttgcctcttcatttgctacgacctgatccggccggatgtcgctcttgagcttgcg
tggatgaacaacatgttggactttgccttcccatacctgttgcagttcatccgtgaatac
actagcaaggtggatgatttagtgaaggacagaattgagtcacagaatgaagaaagagtc
aaagagaaggaggagaaagatcttgttgctcagcagaacatgtatgcgcaattgcttcct
cttgctttgcctgctccgccaatgcctggcatgggtggccctccacctccgatgggtggg
atgggcatgcctccaatgggtggaatgggtatgccgccgatgggccctggtccgatgcca
gcattcgggatgccagcaatgggaagctactga

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