KEGG   Zea mays (maize): 100193880
Entry
100193880         CDS       T01088                                 
Name
(RefSeq) uncharacterized protein LOC100193880
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
zma  Zea mays (maize)
Pathway
zma03020  RNA polymerase
zma03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100193880
  09124 Replication and repair
   03420 Nucleotide excision repair
    100193880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zma03021]
    100193880
   03400 DNA repair and recombination proteins [BR:zma03400]
    100193880
Transcription machinery [BR:zma03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     100193880
  RNA polymerase III system
   RNA polymerase III
     100193880
  RNA polymerase I system
   RNA polymerase I
     100193880
DNA repair and recombination proteins [BR:zma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100193880
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N DUF6179 CheB_methylest
Other DBs
NCBI-GeneID: 100193880
NCBI-ProteinID: NP_001132429
UniProt: B4FGM1 A0A8J8YGA9
Position
2:37452102..37456222
AA seq 206 aa
MASPDDEISRLFRIRRTVYEMLRDRGYGVRDEQIKLERHKFIERYGNPVRRDELTFNATK
LNGPSDQIYVFFPNEAKPGVKTIRNYVEKMKNENVFAGILVVQQALSAFARSAVQEVSQK
YHLEVFQEAELLVNIKDHVLVPEHVLLTPEDKKTLLERYTVKETQLPRIQITDPIARYYG
MKRGQVVKITRASETAGRYITYRYVV
NT seq 621 nt   +upstreamnt  +downstreamnt
atggcgtcgccggacgacgagataagccggctcttccgcatccgccgcacggtgtatgag
atgctgcgcgaccgcggatacggtgtccgcgacgaacaaatcaagctcgaaaggcacaag
ttcatcgaacgctacggcaaccccgtccgccgtgacgagctcaccttcaacgccacaaag
ttgaacggcccatcggaccagatctacgtgttctttcctaatgaggcaaagcccggggtg
aagacaatcaggaactacgtcgagaagatgaagaacgagaacgtcttcgccggcatactc
gtcgtgcagcaggcgctcagcgccttcgcacgcagcgccgttcaggaggtctcccagaag
taccacctcgaggtcttccaggaagctgagcttcttgtcaacattaaggaccatgtccta
gtgccagagcatgtgctcctgacaccggaagacaagaagactcttctagagcggtacacc
gtgaaggaaacccagctgccccggattcagattacagacccgatagcaagatactatggg
atgaagcgtgggcaggtcgtgaagatcacaagagccagtgagactgctggaagatacatc
acctaccgctacgttgtctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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