KEGG   Zea mays (maize): 100383542
Entry
100383542         CDS       T01088                                 
Name
(RefSeq) uncharacterized protein LOC100383542
  KO
K13126  polyadenylate-binding protein
Organism
zma  Zea mays (maize)
Pathway
zma03015  mRNA surveillance pathway
zma03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100383542
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100383542
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zma03019]
    100383542
   03041 Spliceosome [BR:zma03041]
    100383542
Messenger RNA biogenesis [BR:zma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     100383542
   mRNA cycle factors
    Stress granule specific factors
     100383542
Spliceosome [BR:zma03041]
 Complex C
  Other components
   Complex C specific factors
    100383542
SSDB
Motif
Pfam: RRM_1 PABP RRM_5 RRM_7
Other DBs
NCBI-GeneID: 100383542
NCBI-ProteinID: NP_001349018
Position
9:94033170..94037182
AA seq 643 aa
MASPSTTPSAPIAAEVVPVAEGTPAAVLPPLGSMASLYVGDLAETVDEPQLHALFSQVAP
VATVRVCRDILSGVSLGYGYVNFYSRQEATRALEALNFTPLIGKYIRVMFSNRDPSLRKS
GRANLFVKNLEPNIDSKNLYEIFSSFGAILSCKVATDSAGQSKGYGFVQYETEESAEAAI
NGLNGMLANNRKMFVGLHMRRRDREVKFTNVYIKNLPTEFSEDDLRQEFAPFGEITSAVV
MRDADGASKCFGFVNFKKPEFAIEAVEKANGKAIGDKTLYVGRAQKKEERKAELKTRFGR
GRDNKVDKPNGINLYLKNIDDGINDEGLKKLFEEFGQVASCKVMVDARGRSKGSGFVSFA
TAEAGQRAINRMNGRIVGKKPLYVGLAQPKEERKAMLMAHFAQRNLAMAASQYAGPQQVY
FGHPSSPGPIAPPQGAVFGFPQHFVPGMGPISPVMMPPHNMQRPRYPGPAPYRQQQAMIH
ANANHMPNARPGPYPAMPPQAFPGAGATAWQQHAVSRTTTAVASAGPADQHQILGNKLYA
LVEQLERDHAGKVTGMLLEMDKAEILQLLRSPEALRAKVREAMAVLQRTKAGGSVDPAAA
AAVAKAGDSAADPPPAAAAAAAAVKAGSSADPGAAAAAPTVNA
NT seq 1932 nt   +upstreamnt  +downstreamnt
atggcgagcccctcgacgacgccctcggctccgatcgcggcggaggtagtccccgtggct
gaggggactccggcggcggtactgccgccgctcggctcgatggcgtccctgtacgtgggt
gacctggctgagaccgtagacgagccgcagctccacgcgctcttcagccaggtcgcgccc
gtcgcgacggtgcgcgtctgccgggacatcctaagcggcgtctcgcttggatatggttac
gtaaatttttactcgcgccaggaagctactcgtgcgctagaagctttgaattttacccca
ttgatcggaaagtacatccgggttatgttctctaaccgggatccaagtctgcgtaagagt
ggacgtgctaacttgtttgtaaagaaccttgagcctaacattgatagcaagaacctgtat
gagatcttctcctcctttggcgcaatactgtcatgcaaggtggccactgattcagctggt
cagtcaaaagggtatggttttgtacaatatgagactgaggaatctgccgaagctgccatt
aacggacttaatggtatgctagcaaataacagaaaaatgtttgtgggcctacacatgcgc
cgtcgggacagagaagtgaagttcacaaacgtatatataaagaatttgcccactgaattc
agtgaggatgacctccgccaggagtttgcaccgtttggtgaaattactagcgctgtggtc
atgagggatgctgatggtgcctccaaatgtttcggctttgtaaattttaaaaagccagag
ttcgctatagaggctgttgagaaggccaatgggaaggccatcggtgacaagactttatat
gtcggaagggctcagaagaaggaagagagaaaagccgagctgaaaacgagatttggacgt
ggcagagacaacaaggttgataaacctaatggtatcaatctatacttgaagaacattgat
gatggtataaacgacgaggggttgaagaaattattcgaagaatttggtcaagttgcttca
tgcaaggtaatggttgatgctcgaggaaggagcaagggttcagggtttgtgtcgtttgct
actgctgaagctggccaaagggcgataaaccgaatgaatggtaggattgttgggaagaaa
ccactctacgttggtttagctcagcctaaggaggaaagaaaagccatgctaatggcgcat
ttcgctcaacgtaacctggcaatggcagcttctcaatatgccggacctcagcaggtctat
tttggtcacccttcttcacctggcccgatcgcgcctcctcagggcgcagtatttgggttt
ccgcaacacttcgttccgggaatggggcctatctctcccgttatgatgccgccacacaac
atgcagcgaccaaggtatcctggtcctgctccatatcggcagcagcaggcgatgatccac
gcaaatgccaatcacatgccgaatgccagacctgggccttaccctgcaatgccgcctcag
gccttcccaggtgcgggtgccacggcgtggcagcaacacgctgtaagcaggacaactact
gccgtagcatctgctggaccggcagaccaacatcagattctcggcaacaagttgtacgcg
ctggtcgaacagctcgagcgcgatcacgctggcaaagttaccgggatgctgctggagatg
gacaaggccgagatcctacagctgctgcggtctccggaggctctccgggccaaagtccgc
gaagccatggctgttctacagcggaccaaggccggaggctccgtcgatcctgccgccgcc
gctgctgtcgccaaagccggagactcggcagccgatcctcctcctgctgccgccgccgcc
gccgccgccgttaaggccggaagctcagccgatcccggtgccgccgccgccgcaccaacc
gtaaacgcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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