KEGG T01088: 103627791

Zea mays (maize): 103627791

Entry

103627791         CDS       T01088

Name

(RefSeq) probable E3 ubiquitin-protein ligase RHC1A

K11982

E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]

Organism

zma Zea mays (maize)

Brite

KEGG Orthology (KO) [BR:zma00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zma04131]
    103627791
   04121 Ubiquitin system [BR:zma04121]
    103627791
Enzymes [BR:zma01000]
2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103627791
Membrane trafficking [BR:zma04131]
Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    103627791
Ubiquitin system [BR:zma04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    103627791

SSDB

Motif

Pfam:

zf-RING_2 zinc_ribbon_9 zf-C3HC4_2 zf-RING_11 zf-C3HC4 zf-RING_UBOX zf-rbx1 zf-RING_5 zf-Nse zf-ANAPC11 zf-RING_16 zf-C3HC4_3 Vps39_2

Other DBs

NCBI-GeneID:

103627791

NCBI-ProteinID:

XP_008646313

Position

5:218650386..218652166

AA seq 321 aa
MSATTAPVRHRTCRMYWCYQCGRALRIISYPSTDVFCPRCFGRFLHEIDLPARPAFPPPH
FLPHPFHPQRQHDGHPRRWVIYGGEPATTVPGRAFRQPAAPAQGPATHPAPAPAPVRRRV
PSPPPPPPVLRRPTTAPAVDLGNYFTGPNLNNLIEELTQNDRPGPAPAPPSAIDSLPTVR
ITGAHLSDGSQCPVCKEDFELGEAARQLPCKHVYHSDCIVPWLRLHNSCPVCRYQLPGAG
STSNGGSQAAPRGGSDGDRNSRNGERGREPPTLVRWGPFSWLFPPHGMDDPDDAWEHGRR
GRHDAADAGAFYAWWRSLFLI

NT seq 966 nt +upstreamnt +downstreamnt
atgtcggcgacgacggcgcccgtgcgccaccggacgtgccgcatgtactggtgctaccag
tgcggccgcgcgctccgcatcatctcctacccgtccaccgacgtcttctgcccgcgctgc
ttcggccgcttcctccacgagatcgacctgccggcgcgccccgcgttcccgccgccgcac
tttctgccgcacccgttccacccgcagcgccagcacgacggccacccgcgccgctgggtc
atatacggcggggagccggcgacgacggtaccaggccgcgcgttccgccagcctgctgcg
ccggcgcagggacctgccacgcatcctgctcctgcgccggcgccggttcgacggcgcgtg
ccctccccgccgccgccgccgccggtactgcggcggccgaccacggccccggccgtcgac
ctcgggaactacttcacggggccgaacctgaacaacctcatcgaggagctgacgcagaac
gaccggccggggccggcgccggcgccgccgtcggccatcgactcgctcccgacggtgcgg
atcaccggggcacacctgtcggacggctcgcagtgccccgtgtgcaaggaggacttcgag
ctcggggaggccgcgcggcagctgccgtgcaagcacgtctaccactccgactgcatcgtg
ccgtggctccgcctgcacaactcctgcccggtctgccggtaccagctgccgggagccggg
tccacgtccaacggcggcagccaggccgcacctcgcggcggaagcgacggcgacaggaac
agcaggaacggggagagggggagagagcccccgacgttggtgcggtgggggccgttctcg
tggctgttcccaccgcacgggatggacgaccccgacgacgcgtgggagcacgggcggcgc
ggcaggcacgacgcggccgacgccggcgcattctacgcttggtggcgctctctgtttctc
atatag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (13)   
   Pfam (13)   
All databases (27)   

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