KEGG   Zea mays (maize): 103629533
Entry
103629533         CDS       T01088                                 
Name
(RefSeq) pre-mRNA-processing-splicing factor 8A
  KO
K12856  pre-mRNA-processing factor 8
Organism
zma  Zea mays (maize)
Pathway
zma03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103629533
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zma03041]
    103629533
Spliceosome [BR:zma03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    103629533
 Complex C
   U5 SnRNP specific factors
    103629533
SSDB
Motif
Pfam: PROCN PRP8_domainIV U6-snRNA_bdg PRO8NT U5_2-snRNA_bdg PROCT RRM_4 JAB
Other DBs
NCBI-GeneID: 103629533
NCBI-ProteinID: XP_008648851
UniProt: A0A1D6LLK8
Position
6:complement(89752872..89769141)
AA seq 2366 aa
MWNGVPPPPPPPLQMAAAPPPPGTTVPGAGQPPPPPPPPAGASQGGKPLTPMELEAQLVE
KARKWHQLNSKRYGDKRKFGFVEAQKEDMPPEHVRKITRDHGDMTSKKYRHDKRVYLGAL
KFVPHAVYKLLENMPMPWEQVRHVKILYHITGAITFVNEIPWVVEPIYLAQWGTMWIMMR
REKRDRRHFKRMRFPPFDDEEPPLDYADNLLDVEPLEAIQLELDEEEDAAVYEWFYDHKP
LMKTKLINGPSYRKWHLSLPIMATLYRLAGQLLSDLIDRNYFYLFDMESFFTAKALNMCI
PGGPKFEPLYRDMEKGDEDWNEFNDINKLIIRQPLRTEYRIAFPHLYNNRPRKVKLGIYH
TPMIMYIKTEDPDLPAFYYDPLINPITSTNKVDRRERKAAEEEDDEDFCLPEDVEPLLKQ
TELYTDTTAAGISLLFAPKPFNMRSGRTRRAEDIPLVSEWYKEHCPPAYPVKVRVSYQKL
LKCYVLNELHHRPPKAQKKKHLFRSLQATKFFQTTELDWAEAGLQVCKQGYNMLNLLIHR
KNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDANIQFRLGNVD
AFQLADGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFW
APMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVM
HDVLDAMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKADWW
TNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNYLKDGPYVTPEEAVAIY
TTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQLQREELGLIEQA
YDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEG
DKRHLFPNWVKPADSEPPPLLVYKWCQGINNLLDIWDTSDGQCVVMLQTKFEKFFEKIDL
TLLNRLLRLVLDHNIADYVTAKNNVVLSYKDMSHTNSYGLIRGLQFASFVVQYYGLVLDL
LILGLTRASEIAGPPQMPNEFLTYADTKVETRHPIRLYSRYIDKVHILFRFTHEEARDLI
QRYLTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEW
ENNFVSVYSKDNPNLLFSMCGFEVRILPKIRMTQEAFSNTKDGVWNLQNEQTKERTAIAF
LRVDDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTYFREATVHTQELLDLLV
KCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSKQTDVG
VTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQSQNRRLTLEDLE
DSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNN
YRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQI
PNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESV
VMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAHRWTMSKPSLVSESK
DVFDQKASNKYWIDVQLRWGDYDSHDVERYTRAKFMDYTTDNMSIYPSPTGVMIGIDLAY
NLHSAFGNWFPGSKPLLQQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYG
EIFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAG
QKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSEL
QLPFQACLKIEKFGDLILKATEPQMVLYNIYDDWLKSISSYTAFSRIVLILRALHVNNEK
AKMLLKPDKTIVTEPHHIWPTLNDEQWLKVECALRDLILSDYAKKNNVNTSALTQSEMRD
IILGAEIAPPSQQRQQIAEIEKQSRETTQLTAVTTRTTNVHGDELIITTTSPYEQQAFAS
KTDWRVRAISATNLYLRVNHIYVNSDDIKETGYTYIMPKNILKKFICIADLRTQIAGFLY
GLSPQDNPQVKEIRCIAMPPQHGTHQMVTLPANLPEHEFLNDLEPLGWMHTQPNEAPQLS
PQDLTSHAKILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRSNKDNGSNPH
GYLPTHYEKVQMLLSDRFLGFYMVPDNAPWNFNFMGVKHDPQMKYNMKLGMPRDFYHEDH
RPTHFLEFSNIEEGEAAEGDREDTFT
NT seq 7101 nt   +upstreamnt  +downstreamnt
atgtggaacggcgtgccgcctccgcctccgcctccgttgcagatggcggcggcccctcct
ccccctggcacgacggtgcccggggcaggccagcccccgcccccgcccccgccgcctgcc
ggggcgtcgcagggcggcaagccgctgacaccgatggagctggaggcgcagctggtggag
aaggcccgcaaatggcaccagctcaactccaagcgctacggcgacaaacgcaagttcggg
ttcgtcgaggcacagaaggaggacatgccccctgagcacgtccgcaaaatcaccagagac
catggagacatgacttccaagaagtacagacatgataagcgtgtttatcttggagcactc
aaatttgtgccccacgctgtgtacaaactgctggagaacatgccgatgccttgggagcag
gttcgccatgtgaaaatcttgtatcatatcactggggctatcacttttgtaaatgaaatc
ccatgggttgttgaacccatatacctcgcacagtggggtacaatgtggattatgatgcga
cgagagaagagggataggcgtcattttaaacgaatgcggtttcctccatttgatgatgag
gaacccccactggactatgctgataatttgttggatgttgaaccacttgaagctatacag
ttggagttggatgaggaggaagatgcagctgtctatgaatggttctatgatcacaaacct
ctgatgaagacgaagctcataaatggccctagttacaggaaatggcatctatctcttccc
ataatggcaacactatatcgccttgctggccagctgttgtcagatctgatcgataggaat
tatttctacctatttgatatggagtctttctttactgccaaggcccttaatatgtgcatt
ccagggggtccgaagtttgagccattataccgtgatatggagaagggtgatgaggactgg
aatgagttcaatgatataaataagctcatcatacgtcagccacttcgaactgagtacagg
attgctttccctcacctgtacaacaacaggccaaggaaagtgaaacttggtatatatcat
acccccatgataatgtatatcaagactgaagatccagacctgccagcgttctactatgat
cctctgataaaccctatcacttcaaccaacaaggttgatcgtagggagaggaaagcagct
gaagaggaagatgatgaagatttttgtctcccagaagatgtagagcctctcttgaaacag
actgaactctacactgatacaacagctgctggtatatcgttactttttgctccaaagcct
tttaacatgagatctggtcggacacgtcgtgcagaggatattcctcttgtatctgagtgg
tacaaggaacattgccctccagcttatcctgtgaaagttcgggtgagctatcagaagcta
ttgaagtgttatgtgctcaatgagctacatcataggcctcccaaggctcagaaaaagaag
catctgttccgttcactccaagcaactaagtttttccaaactactgagcttgactgggca
gaagcaggcttgcaagtttgcaagcaggggtacaacatgttaaacttgttgattcacagg
aagaatcttaattatctccatttagattacaatttcaatttgaagcctgtgaagactctt
acaacaaaggaaaggaagaaatctcgttttggaaatgcatttcatctgtgtcgtgagatt
ttacgacttacgaagttggttgttgatgctaacatccagttccgtctgggaaatgtggat
gccttccagttggctgatggtctgcaatatatattttctcatgttggacagttaactggt
atgtataggtacaagtaccgattgatgaggcagattaggatgtgcaaagatctgaagcac
ttgatatattaccgtttcaacactggtcctgttggcaaaggacctggttgtgggttttgg
gctccaatgtggagagtgtggctctttttccttcgaggtattgtcccactattggagcgt
tggttgggtaatcttttggcacggcagtttgagggtcgtcattccaagggtgtggccaaa
actgtaacaaagcaacgtgttgagtctcacttcgatttagaacttcgcgctgcagttatg
cacgatgttttagatgctatgccagaaggcatcaagcaaaataaggctcgaactatatta
cagcatcttagtgaggcatggcgttgctggaaggcaaatatcccatggaaagtccctggt
ctacctgtgcctattgagaacatgattcttcgttatgtgaagtcgaaggcagactggtgg
actaatgtcgctcattacaatcgtgagcgtatcaggcgtggtgctacagttgacaaaact
gtttgtcggaaaaatctaggaaggttaactcgtctgtggcttaaggcagagcaagagagg
caacacaattacttgaaagatgggccatatgtaactcctgaagaggctgttgctatctat
acaacaactgttcattggctggaatcaagaaagttctcgccaattccttttccgccgttg
tcatacaagcatgacactaaacttcttatacttgcactggaaagactgaaggagtcctac
agtgtagcagttagattgaaccaattgcaacgggaggagcttgggttgatcgaacaagcg
tatgataatccacatgaagcactgtcaaggataaaaaggcacctccttactcagcgagct
ttcaaagaagttggtatagaattcatggacttgtacagctacttgattccagtatatgaa
attgaacctcttgaaaagatcactgatgcataccttgaccagtacctgtggtacgagggg
gacaaacgacacctctttccaaattgggttaagcctgctgattcagaaccaccacctctt
cttgtttataaatggtgccagggcataaataatttactggatatatgggacacaagtgat
gggcagtgtgttgtgatgctccagacaaaatttgagaagttctttgaaaaaattgatctg
actctgttgaacaggcttctgcggttggtcttggatcataacatagctgactatgtcact
gcaaagaacaatgtagtgctgtcttacaaggacatgagtcacacaaattcttatggtctc
attcgagggcttcaatttgcatcttttgttgttcagtactatggccttgtgctggatctc
ctgattcttggccttactcgtgcaagtgagattgctgggccacctcaaatgccaaatgaa
tttcttacatatgctgacacaaaagttgagacaaggcatcccatcagattgtattctcga
tatattgacaaggtgcatatattgttccggttcacccatgaggaagcacgggatctcatt
cagcgttacttgacagaacatcctgatcctaacaatgagaacatggttggttacaataac
aagaaatgttggcccagagatgcaagaatgaggcttatgaaacatgatgtgaatcttgga
agaagtgtgttctgggatatgaagaaccgccttccgaggagcattacaactttagaatgg
gagaataactttgtctctgtttacagcaaggacaatccaaacctgctttttagcatgtgt
ggctttgaagtccggatactgccaaagatacggatgactcaggaggcgttcagcaacaca
aaggatggggtatggaatttgcagaatgaacagacaaaagaaaggacagcaattgccttc
ctgagggttgatgatgaacatatgaaagtgttcgagaaccgtgtcaggcagattctaatg
tcatctgggtcaacaacgttcacgaagatagtcaataagtggaatacggctcttattggc
cttatgacatattttcgtgaagcaactgtccatacccaggagcttttggatttactagtc
aaatgtgaaaacaagatccagacccgtataaagattggcctgaattcaaagatgcctagc
aggtttcctccagttatcttctatactcccaaggagattggaggtcttggaatgttatca
atgggccatattcttataccacagagcgatcttaggtatagcaagcagacagatgttggt
gtaacacattttagaagtggcatgagccatgaagaggaccagctcattccaaacttgtat
cgttacattcagccatgggagagtgagtttattgattcacagcgtgtttgggctgagtat
gctttgaagaggcaggaagcacaatcacagaacagacgattaactcttgaggatctcgaa
gattcatgggatagaggtatacctcgtatcaacactcttttccaaaaagaccgccataca
ctagcctatgacaaaggatggagagtgagaacggattttaagcaatatcaagtgctgaaa
cagaacccattctggtggacacatcagcggcatgatgggaagctttggaatctaaataac
tacagaactgatgtcattcaagcacttggtggtgtagaaggcatcctggagcatacatta
tttaaagggacttacttccctacttgggagggtctgttttgggagaaggcatcaggtttc
gaagagtcaatgaaatacaagaagctgacaaatgcacaacgttctggtctcaatcaaatc
cccaatcgaagatttaccctgtggtggtcaccaaccatcaatcgtgcaaacgtgtatgtt
ggtttccaggtccagctagatcttacggggatattcatgcatgggaaaatcccgacgttg
aagatttctctgatccagatcttccgtgcacatctgtggcaaaagatccatgaaagtgtt
gttatggatctttgccaagttttggaccaggagttggatgcacttgagattgagactgtg
cagaaggagacaatacatcccaggaagagttacaagatgaacagctcctgtgcagatatc
cttctctttgctgcacacagatggacgatgtccaaaccaagcttagtttctgagtccaag
gatgtctttgatcagaaagcaagtaacaagtattggattgatgtgcaactgcgttgggga
gactatgattcacatgacgtagaacgatatacaagagccaagttcatggattacacaaca
gacaatatgtccatatacccatcgccaactggtgtgatgattggaatcgatctagcatat
aatttgcactctgctttcggtaactggtttcctggatcaaagccactacttcagcaggca
atgaacaagatcatgaagtcaaatcctgccctgtatgtcctgagggagagaataaggaag
ggtctgcagttgtactcttctgaacccacagaaccgtacctgtcttcacaaaactatgga
gagatattcagcaatcaaatcatatggtttgtggatgatacaaatgtgtatcgagtcact
attcacaaaacatttgagggtaacttgaccaccaaaccaatcaatggtgctattttcatt
ttcaatccaagaacgggtcaactttttcttaaggttatccacacaagtgtatgggcaggg
caaaaacgtcttgggcagctggccaagtggaaaacagctgaggaggttgctgcattagtt
cgatctcttcctgtagaagagcagccaaagcaaattattgtgacaaggaagggcatgtta
gatcccttggaggtccatctacttgacttccctaacattgttatcaaaggcagcgagctg
cagcttcctttccaggcttgcttgaagattgagaagtttggtgatctgatactgaaggca
actgaaccacaaatggttctttataatatatatgatgattggttgaaaagtatctcatca
tacacagcattctctcgcattgtgcttatcctacgtgcacttcatgtgaataatgagaag
gcaaagatgttgctcaaacctgacaaaacaattgttactgaaccacatcatatatggcca
actctgaatgatgaacagtggttgaaggttgaatgtgcactaagggacctcattctttcc
gattatgcaaagaaaaacaatgttaatacttctgcactcacacaatctgaaatgcgagat
atcatccttggtgctgaaattgctccaccatcacagcagaggcaacagattgctgaaatt
gagaaacagtcaagagagacgactcagttaactgctgtaaccacaaggacaacaaatgtg
catggagatgaactcattatcacaaccacaagtccatacgagcaacaagcattcgcatcc
aagactgattggcgtgtcagagccatctctgccacaaacttgtatcttcgtgtaaatcac
atttatgtcaattctgatgatataaaggagactggctacacttacattatgccaaagaac
atattgaagaaattcatatgcatagcagatctgcggacacaaattgctggatttttgtat
gggctgagtccacaggacaatcctcaagtcaaagagattaggtgtatagccatgcctcca
cagcatggaacacaccagatggtgactcttccagcaaatcttcctgagcacgagttcctt
aatgatctagaacccttgggatggatgcatacacagccaaatgaagctccacagctatcg
ccacaggacctgacatcacatgccaagattctggagaacaacaaacaatgggatggtgag
aagtgcatcattctgacatgcagcttcaccccaggatcttgctcgttgactgcatacaag
ctgacaccaagcggttacgagtggggacgcagcaacaaggacaacggaagcaatccacat
ggataccttccaactcactacgagaaggtccagatgcttctgagcgaccgcttccttgga
ttctacatggttccggataacgctccttggaacttcaacttcatgggagtgaagcacgac
ccacagatgaagtacaacatgaagctgggcatgccccgggacttctatcacgaggaccac
aggccaacacacttcctcgagttcagcaacatcgaggagggtgaggccgctgaaggcgat
agggaggacacattcacgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (23)   

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