KEGG   Zea mays (maize): 103631117
Entry
103631117         CDS       T01088                                 
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
zma  Zea mays (maize)
Pathway
zma03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103631117
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zma03019]
    103631117
Messenger RNA biogenesis [BR:zma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103631117
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     103631117
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 103631117
NCBI-ProteinID: XP_008650335
UniProt: A0A804PSQ0
Position
6:78826601..78827521
AA seq 306 aa
MRTHDGEPSAAASPPLYSFVHVVLQQQYPRQPAPMAFTPGGSMMEAAAKKEVRAEVRDVW
AGNLDAELANLSAVLPHYPCVCVDTEFPGAVHGSDTPRHLRGPRESYALVKRNVDDLKLL
QVGIALSGPAGRFPVAWQFNLRGFDPARHPYAPASIAMLRAQGMDFAALNKFGVDPYDFA
VGFHRSGLACGQLTWTAFSGAYDFAYLAKVLTGGQPLPATLDGFLALVRRLFGCNVLDVK
HLARCCAMRGGLEQVSAALGVERAAGRAHCAGSDSLLTTDVLLAMMNRFFTNVNVLAHAG
TIVDLA
NT seq 921 nt   +upstreamnt  +downstreamnt
atgcgcacccacgacggcgagccgtcagcagccgcctcgcctccgctgtacagcttcgtc
cacgtcgtcctccagcagcagtacccgcgacagccggcgcccatggcgttcacgccgggg
ggctccatgatggaggccgccgccaagaaggaggtccgcgccgaggtgcgcgacgtgtgg
gccggcaacttggacgcggagctcgcaaacctctcggcggtgctgccgcactacccctgc
gtatgcgtggacacggagttccccggcgcggtgcacggctcggacacgccgcggcacctc
cgcggcccgcgcgagagctacgcgctggtcaagaggaacgtggacgacctcaagctgctc
caggtcgggatcgcgctgtcgggccccgccggccgcttccccgtcgcgtggcagttcaac
ctccgcggcttcgaccccgcgcgccacccgtacgcgccggcctccattgccatgctccgc
gcgcaggggatggacttcgccgcgctgaacaagttcggcgtcgacccctacgacttcgca
gtcgggttccaccgcagcggcctcgcctgcggccagctcacctggaccgcgttctcgggc
gcctacgacttcgcctacctagccaaggtgctcaccggcggccagccgctgccggcaacg
ctggacgggttcctcgccctggtacgtcggctgttcggctgcaatgtgctcgacgtcaaa
cacctcgccaggtgctgcgccatgcgcggggggctggagcaggtgtccgccgcgctcggc
gtcgagcgcgccgccggccgcgcgcactgcgccggctccgacagcctgctcaccaccgac
gtactcctggcaatgatgaatcgcttcttcaccaacgtcaatgtgctcgcgcacgccgga
actatcgtagatctagcctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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