KEGG   Zea mays (maize): 103631416
Entry
103631416         CDS       T01088                                 
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
zma  Zea mays (maize)
Pathway
zma03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103631416
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zma03019]
    103631416
Messenger RNA biogenesis [BR:zma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103631416
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     103631416
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 103631416
NCBI-ProteinID: XP_035816054
Position
6:135353625..135359568
AA seq 291 aa
MPMYSKSELIHVPPPPCSRPRYVMAPPLVFTSIGASMNAAVRDVWASNFDEELSNLSAVL
PRYPCVCVDTEFPGAVHDSNLPRYMRGPRESYELVKRNVDDLNLLQVGIALSGPAGRFPI
AWQFNIRGFDPALHPHAPASIAMLREQGMDFAMLNEFGIDPEDFAAGFRRSGLACGWLTW
TAFSGSYDFGYLAKALTGGQPLPDTLDGFLALVRRLFGHSVFDVKHLARCCAMRGGLEQV
ATALGVKRAAGRAHCAGSDSLLTTDVLLLMMHRFFRNVDVLAHAGTIVDLT
NT seq 876 nt   +upstreamnt  +downstreamnt
atgccgatgtactccaagtcagaactcatccacgtgccgccaccgccatgcagccgtccc
cgttacgtcatggcgccacccctggtcttcacgtccatcggcgcgtcgatgaacgccgcc
gtgcgcgacgtttgggccagcaacttcgacgaagagctctccaacctatcggcggtgctg
ccgcgctacccctgcgtgtgcgtggacaccgagttccccggcgcggtacacgactcgaac
ttgccgcggtacatgcgcggtccgcgcgagagctacgagctggtgaagcggaacgtagac
gacctcaacctgctgcaggtcgggatcgcgctgtcgggccccgccggccggttccccatc
gcgtggcagttcaacatccggggcttcgaccccgcgcttcacccgcacgcgccggcctcc
atcgccatgctccgcgagcaggggatggacttcgccatgctgaacgagttcggcatcgac
cccgaagacttcgccgccgggttccgccgcagcggcctcgcctgcgggtggctcacctgg
accgccttctcgggctcctacgacttcgggtacctcgccaaggcgctcaccggcggccag
ccactgccggacacgctggacggcttcctcgccctggtccgtcggctgttcggacacagt
gtgttcgacgtgaagcacctcgccagatgctgcgccatgcgcggggggcttgagcaggtg
gccaccgcgctcggcgtcaagcgcgccgccggccgcgcgcactgcgccggctccgacagc
ctgctcaccaccgacgtcctcctgctaatgatgcatcgcttcttcaggaacgtcgatgtg
ctcgcgcacgccggaaccatcgtagacctcacctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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