KEGG   Zea mays (maize): 103633484
Entry
103633484         CDS       T01088                                 
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH12
  KO
K12854  pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6]
Organism
zma  Zea mays (maize)
Pathway
zma03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103633484
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zma03041]
    103633484
Enzymes [BR:zma01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     103633484
Spliceosome [BR:zma03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    103633484
 Complex C
   U5 SnRNP specific factors
    103633484
SSDB
Motif
Pfam: Sec63 DEAD Helicase_PWI ResIII Helicase_C BRR2_plug AAA_22 AAA_30 AAA_11
Other DBs
NCBI-GeneID: 103633484
NCBI-ProteinID: XP_008653400
UniProt: A0A1D6IKW3
Position
7:complement(177971353..177980345)
AA seq 2184 aa
MANLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPTGEPETLWGRIDPRSFGDRAV
QNRPPELEEKLSKSRTKKSKRDAAAALDSADLPRRDAKRRRRAASAQEVSVLSLTDDAVY
KPQTKETRAAYEALLSLIQQQLGGQPLDVLAGAADEVLATLKNDKVKNPDKKKDIEQLLN
PISSQLFDQLVSIGKLITDFHDAAAGDASGAPSADAVDTTLDDDVGVAVEFEEDEDEESD
FDQVQDELDEDEEDDMAELNGPGGMQMGGELDDDDMQNANQGLTVNVQDIDAYWLQRKIS
QAYGDGDIDAQQSQKLAEDILKIIAEGDDRDVENRLVMLLDYEKFDLIKLLLRNRLKIVW
CTRLARAEDQEQRKNIEEEMASDPSLAPILEQLHATRASAKERQKNLEKSIRDEAKRLLN
NDAAAAGADGARDHRAAEWDMESGWLKGQRQLLDLESLSFHQGGLFMANKKCELPTGSFR
TPHKGYEEVHVPALKAKPYETGEKIVKISDMPEWARSAFDGMTQLNRVQSRVYDTALFKP
DNILLCAPTGAGKTNVAVLTILQQIGLHMQDGEFDNTKYKIVYVAPMKALVAEVVGNLSK
RLAGYNVTVRELSGDQNLTKQQIDETQIIVTTPEKWDIVTRKSGDRTYTQMVKLLIIDEI
HLLHDNRGPVLESIVARTVRQIETTKENIRLVGLSATLPNYEDVALFLRVRKESLFYFDN
SYRPCPLAQQYIGITVRKPLQRMQLMNEICYEKVMAAAGKHQVLIFVHSRKETAKTAKAI
RDTALANDTVSRFLKNESASQEILGTHAELVKNNDLKDLLPYGFAIHHAGMARVDRELVE
ELFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGR
PQYDTHGEGIILTGHSELQFYLSLMNQQLPIESQFISKLADQLNAEIVLGTIQNAREACS
WLGYTYLYIRMLRNPTLYGLPADILESDKTLDERRADLIHSAANLLDRNNLIKYDRKTGY
FQVTDLGRIASYYYISHGTISTYNEYLKPTMGDIELCRLFSLSEEFKYVGVRLDEKMELA
KLLDRVPIPVKESLEEPSAKINVLLQAYISRLKLEGLSLSSDMVYIRQSAGRLLRALFEI
VLKRGWAQLAEKALNLCKMVDKQMWSVQTPLRQFTGIPKEILMKLEKKELAWERYYDLSS
QEIGELIRYPKMGRPLHKCIHQLPKLNLSAHVQPITRTVLGFELTITPDFQWDDKVHGYV
EPFWVIVEDNDGEYILHHEYFMLKKQYVDEDHTLNFTVPIYEPLPPQYFIRVVSDKWLGS
QTILPVCFRHLILPEKYAPPTELLDLQPLPVSALRNARYEGLYSAFKHFNPIQTQVFTVL
YNSDDSVLVAAPTGSGKTICAEFAILRNHQKALSGESNMRVVYIAPIEALAKERYRDWER
KFGEFAKVVELTGETAADLKLLDKGEIIISTPEKWDALSRRWKQRKHIQQVSLFIVDELH
LLGSDKGHVLEVIVSRMRRISSHIGSNIRIVALSASLANAKDLGEWIGATSHGLFNFPPA
VRPVPLEIHIQGVDIANFEARMQAMTKPTYTAITQHAKNNKPALVYVPTRKHARLTALDL
CAYSSVEGAGTPFLLGSGDEMDTFTRGVEEETLKNTLKCGVGYLHEGLSELDQELVTQLF
LGGRIQVCVASSTMCWGRPLPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHASRPLQ
DNSGKCVILCHAPRKEYYKKFLFEAFPVESNLHHFLHDHMNAEVVVGVVENKQDAVDYLT
WTFMYRRLAKNPNFYNLQGVSHRHLSDHLSELVETILNDLESSKCVAIEEDMYLKPLNLG
LIASYYYISYTTIERFSSMLTQKTKVKGLLEILASASEYAELPGRPGEEEFIERLVRHQR
FSIEKPKYGDPHVKANALLQAHFSRHTVVGNLAADQREILLSAHRLLQAMVDVISSNGWL
SLALSTMELSQMVTQGMWDRDSVLLQVPHFTKDLARRCQENEGKPIESIFDLAEMAVDEM
RDLLQLSNSQLQDIIEFIKRFPNVDMTYEVREGDDISAGDNVTVQVTLERDMTNVSSEVG
PVHAPRFPKPKEEGWWLVIGDSSTNQLLAIKRVALQKRARVKLEFSAPAEAGRKDYMIYL
MSDSYLGCDQEYEFTVDVKDAGGD
NT seq 6555 nt   +upstreamnt  +downstreamnt
atggccaacctcggcggtggcgccgaggcgcacgcgcgattcaagcagtacgagtatcgc
gccaactccagcctcgtcctcaccacagactcccgcccgcgcgacacccacgagcccacc
ggagagcccgagacgctctggggcaggatcgaccccaggtccttcggcgaccgcgccgtc
cagaacaggccgcccgagctcgaggagaagctctccaagtcgcgcaccaaaaagtctaag
cgcgacgctgctgccgcgctcgactccgccgacctcccccgtcgcgacgccaagcgcagg
cgccgcgctgcttccgcccaggaggtctccgtcctctccctcaccgacgacgccgtgtac
aagccccagaccaaggagacgcgtgccgcctatgaggccttgctcagcctcatccaacag
cagcttggcggccagcccctcgatgtccttgctggggcagctgatgaggtgctcgctaca
ctcaagaatgacaaggtcaagaaccctgataagaagaaggacattgagcagctgctcaac
cctatctccagccagctctttgatcagcttgtctccattggcaagctcatcaccgacttc
catgatgcggcagctggtgatgcttccggtgcgccttccgccgacgctgtggacaccact
ctggatgatgatgttggtgttgctgttgagtttgaagaagacgaagacgaggagagtgat
tttgatcaggtgcaagacgagctggatgaggatgaggaagatgacatggctgagttgaat
ggtcctggaggtatgcagatgggtggtgagttagacgacgatgacatgcagaacgccaat
caggggctgaccgtcaatgttcaggacatcgatgcttactggctccagaggaagatatcc
caggcatacggggatggggacattgatgctcaacagagccagaagcttgctgaggatatc
ttgaagatcattgccgagggtgacgacagagacgtcgagaatcgccttgtcatgctcttg
gactatgagaagtttgatctcattaagttgttgctgcgcaaccgtctcaagattgtttgg
tgcacccgcttagccagggccgaagatcaggaacagaggaagaatatagaggaagagatg
gcaagtgacccaagtttggctccgatattggagcagctacatgcaaccagagcatccgca
aaggagaggcagaagaacctggagaaaagcatcagggatgaggccaagaggctcctcaac
aatgatgctgctgctgctggtgctgatggtgccagggaccacagggcagccgagtgggac
atggagagtggatggctgaaaggacagaggcagttgcttgatcttgaaagcctctcgttc
catcagggtggtctctttatggctaacaagaaatgtgaacttccgactggatcgtttaga
acccctcataagggatatgaggaggttcatgtgccagcactgaaggctaagccctatgaa
acaggagagaagattgtgaagatatctgatatgccagagtgggcacggtcagcttttgat
gggatgacacagctgaacagagttcagagcagggtctatgatactgctcttttcaaacca
gacaatatccttctctgtgctccgactggtgctggcaaaacaaatgtggctgtgcttacc
atccttcagcagattggtctgcatatgcaggatggagagtttgataataccaagtacaaa
attgtctatgtggccccgatgaaagcattggttgctgaagtcgttggaaacctgtctaag
cgtttggcaggttacaatgttactgttagggagctcagtggagaccagaacttgaccaag
caacagattgatgaaacacagattattgtcacaacacctgagaaatgggacattgtgacc
aggaaatcaggggacagaacctatacccaaatggtgaagctgttaatcattgatgagatt
catctgctacacgataacagagggcctgttctggagagcattgttgctaggacagtcagg
cagattgagacgacaaaggagaatattcgtctggttgggctctctgcgactctaccaaac
tatgaagatgttgcattattcttgcgcgttcgcaaagaaagcctcttctattttgacaac
agttaccgaccttgccctcttgcccagcaatacattgggatcactgttaggaagccacta
cagaggatgcagttgatgaatgagatttgttatgagaaggttatggctgccgctggtaag
catcaagtgcttatatttgtacactcaaggaaggagacggcaaagactgccaaagccatc
agagatacggcgttggcaaatgacactgtcagccgctttctgaagaatgagagtgcaagc
caagagatccttggcactcatgctgaacttgtcaaaaacaatgatcttaaagaccttttg
ccttatggatttgctattcatcatgctgggatggcaagggttgaccgtgagcttgttgaa
gaactttttgctgacaagcatattcaagtacttgtatccactgctacccttgcatggggt
gtcaatttgcctgcacatactgttatcataaagggtacacagatttacaatccagaaaaa
ggtgcttggacagaactaagccctctggatgttatgcagatgcttggtcgtgcaggaagg
cctcagtatgatacgcatggagaggggataatcttgactggccacagtgaattgcagttc
tacctgtctcttatgaaccagcagctgcctattgagagtcagttcatatccaaattggct
gatcaattgaatgcagagattgttctggggactattcagaatgctcgtgaagcatgctcg
tggcttggctatacttacctctatattcggatgctccgcaatccaacattgtatggtttg
ccagcagatatcttggagagtgataaaacacttgatgaaaggagagctgatttgatacat
tccgctgcaaatctactggataggaacaatctgataaagtatgacaggaaaacaggatac
ttccaagttactgacctgggaaggattgccagttattattatatcagtcatggaactatt
tcaacatacaatgagtacttaaaacctacaatgggtgatatcgaactgtgccgactgttt
tctctgagtgaagaatttaagtatgtaggtgtcaggcttgatgagaaaatggaactggca
aagcttttggatcgtgtgccaatacctgtgaaagagagcttggaggaacccagtgcaaag
atcaatgttctgctgcaagcatatatttctaggttgaaactggaaggcctttctcttagt
tctgatatggtctacatcagacagagtgctggacgtctcttacgggcactattcgagatt
gttttgaagaggggatgggctcaactagcggagaaagcactgaatctttgcaagatggtt
gataaacaaatgtggagtgtccaaactcccttgaggcagtttactggaattcctaaggag
atcttgatgaaacttgagaagaaggagttggcttgggagaggtactatgatctgtcctca
caagaaattggtgagctgatccgctatcccaagatggggaggccgctgcacaagtgcatc
caccagttaccaaagctgaatctttcagcccatgtccagcccattactcgtacagttttg
ggttttgagctgacaattacacctgatttccagtgggatgataaggtacatggatatgtg
gagcccttttgggttattgttgaggataatgatggcgagtacattcttcaccatgaatat
ttcatgcttaagaaacagtatgttgacgaagatcatacattgaacttcacagtgccgata
tatgagccgctgcctcctcagtatttcatacgtgttgtgtctgacaagtggcttggttct
cagacaattctccctgtctgctttaggcatttaattctaccagaaaaatatgctccacca
actgaattgcttgatctgcagcctcttcctgttagtgcattgagaaatgcaagatatgag
ggcctctatagtgcttttaagcatttcaatcccatccagactcaagtattcactgtcttg
tataacagcgatgacagcgtgttggtcgctgcgccaacaggcagtgggaagacgatatgt
gcagagtttgctatactaaggaaccaccagaaggcattgtctggcgagagcaacatgcgg
gttgtttatatagctcccattgaagctctcgcaaaagaaagatacagggactgggagcgg
aaatttggagagtttgccaaggtagttgagctcactggtgaaacggcagctgatttgaag
cttctggataaaggtgaaatcataatcagtactcctgaaaagtgggatgcattgtctcgc
cggtggaaacagcgaaagcacatccaacaggtcagcttattcatagttgatgaacttcat
ctacttggatctgataagggacatgttttggaagtcattgtatctaggatgaggcgtatt
tccagtcatattggcagtaacatacggatcgtagcactttcagcatcacttgctaatgct
aaagatcttggtgaatggattggtgccacctctcatggccttttcaacttccctccagca
gtgagacctgtgccactggaaattcacatccagggtgtggatatagcgaactttgaggca
aggatgcaagcaatgacaaagcctacctacactgccatcacacagcatgcaaagaacaat
aaacctgccctggtgtatgtaccgacaaggaagcatgcaaggttgactgcattggacttg
tgtgcgtactctagtgttgagggtgctggaactccatttcttcttgggtcaggagatgag
atggatactttcaccagaggtgttgaagaagagactcttaagaatacacttaaatgtggt
gttggctatttgcatgagggtctaagtgagcttgatcaggaacttgtaacccagctgttc
cttggtgggaggatccaagtgtgtgttgcaagcagcacaatgtgttggggaagaccattg
cctgctcatttggtcgttgtcatggggactcagtattatgatgggcgggagaatgctcac
accgactatccaattacagatctgcttcaaatgatgggtcatgccagtagaccacttcaa
gataactcagggaaatgtgttatattgtgtcatgcacctcgcaaagagtactacaagaag
tttctttttgaggccttccctgtcgaaagcaatcttcaccatttcttgcatgatcacatg
aatgctgaggtggtggttggtgttgtagagaataagcaagatgctgtggattatcttact
tggacgttcatgtatcggcggctagctaagaatcctaacttctacaatcttcagggtgta
agtcacaggcatctttcagaccatctttctgagctagttgagactattctgaatgatctt
gaatcgagcaagtgtgtggctatagaggaggacatgtacctgaagcccctcaaccttggc
cttattgcttcatactactatattagctacacaactattgagcgttttagttctatgctg
acccagaagactaaggtgaaaggactcctagagattctagcatctgcctcagaatatgca
gagcttccgggtcgtcctggtgaggaagaattcattgagaggcttgttcgtcaccagagg
ttctctatcgagaaacccaagtatggggatccacatgtgaaggccaatgctctgctgcaa
gcccatttttcaaggcacacagtggtcggaaatctggcagctgatcagcgcgagattctc
ctttctgctcataggttgctccaggcaatggttgatgttatatccagcaatggttggctt
agtcttgctcttagtacaatggagctgagtcaaatggtgacacaaggcatgtgggatcgg
gattctgtgctgcttcaagttccacacttcacaaaagacttggctcggaggtgccaggaa
aatgaagggaagcccatcgagagtatctttgatctagctgagatggctgtcgatgagatg
cgggatctcttacaactatcgaactctcagctgcaagacatcattgaattcatcaagcgg
ttccccaatgttgatatgacctatgaggtccgtgagggtgatgatataagcgctggtgac
aatgtaaccgtgcaggtaactctggagcgtgacatgactaacgtttcatctgaggttggt
ccagtccatgcgccaaggtttcccaagcctaaggaagaaggctggtggctggtgattggg
gacagctccacaaaccagttactggcaatcaaaagagtggcactccagaagagggcgaga
gtgaaacttgagttctctgctccggcagaggctgggagaaaggactacatgatttacttg
atgtcagactcttacttgggctgcgatcaggagtatgaattcaccgttgatgtcaaggat
gctggaggggattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (21)   

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