KEGG   Zea mays (maize): 103638336
Entry
103638336         CDS       T01088                                 
Name
(RefSeq) exosome complex component RRP45A
  KO
K03678  exosome complex component RRP45
Organism
zma  Zea mays (maize)
Pathway
zma03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103638336
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zma03019]
    103638336
Messenger RNA biogenesis [BR:zma03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     103638336
SSDB
Motif
Pfam: RNase_PH_C RNase_PH G_glu_transpept
Other DBs
NCBI-GeneID: 103638336
NCBI-ProteinID: XP_020400173
Position
9:48230302..48231760
AA seq 210 aa
MTPAHPMMLADIQGTYAPESRAVDMEFLCVVAGKHVWSVHVDLHILDDGGNLIDAANIAA
LAALSTFWRPECTVGGDDGQQVTVHDPEVRDPLPLTIHHMPIAVTFAYFGEGNIVVLDPT
YKEEAVMGGRMAAIVNSNGDVCAIQKAGGEGLMSSVTMQCLRIASVKAADITSKIKKAVS
NPLRLMTSRGAHVLIWFPTKFKSKHAYDVK
NT seq 633 nt   +upstreamnt  +downstreamnt
atgacgcccgcccaccccatgatgcttgccgacatccaaggtacatatgctccggagagt
cgagctgttgacatggagttcttgtgtgttgttgccgggaagcatgtctggtctgtgcat
gtggaccttcacatattggatgacggagggaatctcattgatgcagctaatatcgctgca
ttggcagctttatctactttctggaggcctgaatgcacggttggtggggacgatggtcag
caagttacagtgcatgatcctgaggttagggatccacttcctcttacgatacaccatatg
cccatagctgtaacatttgcatattttggtgaaggtaacatcgtggttcttgatcccaca
tacaaggaagaagcagtaatgggagggaggatggctgctatagttaactcaaatggggat
gtttgtgccattcagaaagctggtggagagggtctcatgtcaagtgttaccatgcagtgt
ttaagaattgcttcggtaaaggctgctgatataacaagcaaaataaagaaagcagtaagt
aaccccctcagattgatgactagccgaggtgcccatgtgttgatatggttcccaacaaag
ttcaaatcaaagcatgcttatgatgtaaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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