KEGG   Zea mays (maize): 103647704
Entry
103647704         CDS       T01088                                 
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7
  KO
K12815  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:5.6.2.6]
Organism
zma  Zea mays (maize)
Pathway
zma03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103647704
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zma03041]
    103647704
Enzymes [BR:zma01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     103647704
Spliceosome [BR:zma03041]
 Complex C
  Other components
   Step II factors
    103647704
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C DEAD HA2_N AAA_22 SLFN-g3_helicase AAA_19 AAA_30 Flavi_DEAD AAA_24 nSTAND3 AAA_16 T2SSE ABC_tran AAA_7 Sigma54_activ_2
Other DBs
NCBI-GeneID: 103647704
NCBI-ProteinID: NP_001348297
Position
2:complement(208930710..208946252)
AA seq 1299 aa
MAHAGRSGTGAQAQGAPRPSSHQVPSKTSAVAAGGSSSAPTPTSAAANAMPSSSAQAPPS
EGPDTLADKKRAAGGGSVFKPPPPMVAVAVGSIDEDEKPGPTENDATSLSTTIRSNSLRR
YRGSGSDDKTSLNESTVTDEDERAPSPNHQDEPHRQEAHISRSSQGSRPHGTPRGYGYYD
DRGSHDKHGDRERSASIGYSNSGRRRYHDDRESHTRRAERERSTSNEYTNKRSRHEHSSR
SSRTSARSDWDDGRWEWEDTPRRDYRDNRPGSRRQHPTRSPMLAAASPDARLVSPWLDGN
TPRLAASPWDNVSPSPAPIRASGSSKGSSYSHSSGRSHQLTFSSTTSSNIIDADRSPSNP
DRNSEITEEMMQEMDYNADRAWYDCEEHTTMFDGDHSMYLGDDNSYKKREAEMPKKLTRR
DGSLMTLAQSKKMSQMTADNAQWEDRQLLRSGAVKGTEVQTEFDDEEERKVILLVHDTKP
PFLDGRVVFTKQAEPVMPLKDPTSDMAIIARKGSSLVREIREKQSMNKSRQRFWELAGSK
LGNILGVEKTAEQVDADTAVVGDQGEINFKEEAKFSQHLKDKAEAVSDFAKSKSLSQQRQ
YLPIFTVRDDLLQVVRENQVVVVVGETGSGKTTQLTQYLHEDGYTTTGVVGCTQPRRVAA
MSVAKRVSEEMETDLGDKVGYAIRFEDVTGPNTIIKYMTDGVLLRETLKDADLDKYRVVV
MDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNADKFSKFFGGVPVFHIPGRTFP
VNIMFSKTPCEDYVEAAVKQAMTIHITSGLGDILIFMTGQEEIEATCYALAERMEQLISS
STKTIPKLEILPIYSQLPADLQAKIFQKAEEGARKCIVATNIAETSLTVDGIFYVIDTGY
GKMKVYNPRMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLFTESAYQNEMLPNPVPE
IQRTNLGNVVLLLKSLRVENLLDFDFMDPPPQENILNSMYQLWVLGALNNVGGLTEIGWK
MVEFPLDPTLAKMLLMGEQLECLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVPE
SDHLTLLNVYLQWKSNQYRGDWCNDHFLHVKGLRKAREVRSQLLDILKTLKIPLTSCHME
WDVVRKAICSAYFHNSARLKGIGEYVNCRNGMPCHLHPSSALYGLGYTPDYVVYHELVLT
TKEYMQCVTAVDPQWLAEMGPMFFSVKETDTSLLDHKKRQKEEKTAMEEEMEKLRRQQAE
AARMEKEKEREKRAKQQQQVAMPGLKKGATYLRPKRMGL
NT seq 3900 nt   +upstreamnt  +downstreamnt
atggcgcatgctggtaggagcggaaccggcgctcaagcacaaggtgccccgaggccgagc
agtcatcaagttccctcaaagacaagtgctgtggctgcaggaggttcctcaagtgcacct
acaccgacgagtgctgctgcaaatgcaatgccatcttcaagtgctcaagctccaccatca
gaaggtcctgacacccttgctgacaagaaacgggcagcgggcggtggctctgtgtttaag
ccaccccctcccatggtagctgttgctgtgggttccatcgatgaagatgagaagccagga
cctacagagaatgacgcgacaagcctctctacgacaattcgcagtaactcattgcgacgc
taccgaggaagtggttccgatgataaaacatctttgaatgaatcaacagtcactgatgag
gacgaaagggccccatcacccaaccatcaggatgagccccaccggcaagaggcccacatc
tctagaagctctcaaggttctcgtcctcatggcactcctcgtggttatggttactatgat
gatagaggatcccatgataaacatggtgatcgtgagagatctgcatccattggctatagt
aatagtggaaggcgaagataccatgatgatagagaatctcatactaggcgcgctgagcgt
gagaggtctacatcaaatgaatatactaacaagagaagtcgacatgagcatagctcaaga
agctcaagaacatctgcacgatctgattgggatgatggacgctgggaatgggaagataca
cctcgtcgagattatcgtgataatcgtcctggctcccggagacaacatccaacacgatct
cctatgctcgctgctgcatccccggatgcacgcctggtatctccttggttagacgggaat
acaccacgtctagcagcgtccccgtgggataatgtatccccttcacctgctccaatacgt
gcttctggttcctcaaaagggtcttcttattcacattccagtggaagatcacaccagctt
accttttcatcaactactagttctaatattattgatgctgatagaagcccctcaaatcct
gataggaacagtgagataaccgaggaaatgatgcaggagatggactacaatgctgaccgt
gcatggtatgactgcgaagaacacactaccatgtttgatggtgatcattctatgtatctt
ggagatgataattcctacaaaaagagggaagcagagatgccgaagaagctgactcgtaga
gatggtagcctgatgacccttgctcaaagcaaaaagatgtcacagatgactgctgataat
gctcagtgggaggatagacaattgttgagatctggagctgttaaaggaacagaagtgcaa
actgaatttgatgatgaggaggaacggaaagtaatacttcttgttcatgacacaaagccc
cccttcctggatgggagagttgttttcacaaaacaagcagaacctgtaatgcctctgaag
gacccaacatctgatatggctattattgcacgcaaaggttctagtctggttagggaaatc
cgtgaaaagcaaagcatgaacaaatcaaggcaacgattttgggagcttgctggatctaag
cttggcaatatcttgggtgttgagaaaacagctgaacaggttgatgcagatactgctgtt
gttggtgaccaaggtgagattaattttaaagaagaagcaaagttttcacaacatttgaag
gataaagcagaagctgtcagtgattttgcaaaatcaaaatccctttctcaacaaaggcaa
tatcttcccatatttaccgtccgggatgatctgctacaggttgtgcgtgaaaatcaagtg
gttgtggttgttggtgaaactggttctgggaagactactcaactgactcagtatctgcat
gaggatggatatactaccacaggagttgttggttgtacccaaccaaggcgtgtggctgcc
atgagtgttgctaagcgagtcagcgaggaaatggagactgatctgggagataaagtcgga
tatgccatacggtttgaggatgtcactggtccaaacactataataaagtatatgacagat
ggagtgcttctccgtgaaaccttgaaagatgctgacctcgacaaatatcgtgttgttgtc
atggatgaagcacatgaaagatcactcaacactgatgttttgtttggtatactgaagaag
gttgttgcacgtagacgggattttaaactaatcgttacatctgcaaccctaaatgctgac
aagttctccaagttcttcggaggtgtgcctgtattccatattccgggtcggactttccca
gttaacattatgttcagcaaaacaccatgtgaggactatgtggaagctgcagtgaagcag
gccatgactatccacataaccagcggccttggtgatatcctaatcttcatgactgggcag
gaagaaattgaggctacctgctatgcgcttgctgaacgcatggaacagttaatatcgtca
tccaccaagactatccccaagctagagattctgcccatctactcacagttgcctgctgac
ttgcaagccaagatttttcagaaggctgaagagggcgctcgcaagtgtattgttgctacc
aatattgctgagacctcattaacagttgatggtatcttctatgtcattgataccgggtat
gggaagatgaaggtgtacaacccgcggatgggtatggacgccctccaggttttcccagtc
agccgggcagctgccgaccagcgtgcaggtcgggcaggaagaactggccctggcacatgc
tacagattgttcacagaatcagcctaccagaatgagatgctccctaaccctgtgccagag
atccaaaggactaacctggggaatgtggtgcttttactgaaatccctcagagttgaaaac
ttgctcgactttgactttatggacccaccgccccaggagaatatcctcaactcaatgtac
caactctgggtgttaggtgcattgaacaatgttggtggccttacagaaattggctggaag
atggtggagttcccgttggatccaactctggcaaaaatgcttcttatgggggagcagcta
gagtgccttgatgaggtgctgaccattgtatccatgctatcagtgccgtcagtcttcttc
cggccaaaagaccgagcagaggagagtgacgcagcaagggagaaattctttgtcccagag
tctgaccacctgacactcctgaacgtgtatcttcagtggaagtcgaatcagtatcgaggc
gattggtgcaacgaccacttcctccatgtcaagggtctccgcaaggctcgtgaggtgaga
tctcagctgctggacatactgaaaaccctgaagatccccctgacatcatgccatatggaa
tgggacgtggtgaggaaggctatctgctctgcgtacttccacaattccgcccggttgaag
ggtattggggagtacgtcaactgccggaatgggatgccgtgccacctgcaccccagcagt
gcgctatatggccttggctacactcctgactatgtcgtctaccatgagcttgtcctgacc
accaaggagtacatgcagtgcgtcaccgcagttgatccacagtggctagcggagatgggg
cccatgttcttctctgtgaaggagacagacacctctcttcttgaccacaagaagaggcag
aaggaagagaagacggcgatggaggaggagatggagaagctgaggcggcagcaagcagag
gccgcgcgcatggagaaggagaaggaacgggagaagagagctaagcagcagcaacaggtt
gctatgcccggcctgaagaagggtgcgacttatctgaggcccaagagaatgggtctgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (17)   
   Pfam (17)   
All databases (32)   

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