KEGG   Zymomonas mobilis subsp. mobilis ATCC 29191: ZZ6_0105
Entry
ZZ6_0105          CDS       T02187                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
zmb  Zymomonas mobilis subsp. mobilis ATCC 29191
Pathway
zmb03410  Base excision repair
zmb03430  Mismatch repair
zmb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:zmb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    ZZ6_0105
   03430 Mismatch repair
    ZZ6_0105
   03440 Homologous recombination
    ZZ6_0105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:zmb03400]
    ZZ6_0105
DNA repair and recombination proteins [BR:zmb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     ZZ6_0105
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     ZZ6_0105
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      ZZ6_0105
SSDB
Motif
Pfam: DHH DHHA1 RecJ_OB Peripla_BP_6 CbiJ ATPgrasp_N
Other DBs
NCBI-ProteinID: AFN56010
Position
complement(115389..117149)
AA seq 586 aa
MANLVCGVSSSALGQAWQWRGQNSGFSGENPLEDLIDRILITRGCPRESLSAYRDPKIKN
FMPDPSLLCDMDRAAERLAKAVYKKESIVIFGDYDVDGATSSALMIDLLRQLGVNAGYYI
PDRVAEGYGPAVQSMRKLAEEGANLVVTVDCGAQAYEALEAAKEAGLDVVVVDHHQCQPQ
LPEAHAVVNPNRLDEEEGAQYGHLAAVGVAFLLAAALVRHLRRDGYFSDRPEPKLMALLD
LVALGTVADVAALHGLNRAFVAQGLKVMAARHRPGIAALLDVAGVSRPPTTYDLGFILGP
RINAGGRVGKSDLGVRLLTSLDKNECENLALALNQFNLERRSIEQTVTEAAEGLCEEQVE
RPVMVVAGEGWHPGVIGIVAGRLKQKYDRPIIVIGIDEEGNGKGSGRSLSGVDLGAAVLS
AKQAGLLVNGGGHAMAAGLSIKKDQIEDFATFISERVQKDVETARANKALLIDEVLSAGG
INLSLIEALEAGGPYGAGWPSPHVVAGPVYAIQTRILKEKHLSVIFKGQDGQSFKAIAFN
AVETPITQMVVAAGRDRKLWVAGKIQLNEWNGRKDAQLHIEDIAWA
NT seq 1761 nt   +upstreamnt  +downstreamnt
atggcaaatcttgtctgtggcgtttcttcttctgctctgggtcaggcatggcaatggcgc
ggccaaaattcggggtttagtggagaaaatccgcttgaagacctgattgatcgtattctt
atcacgcgcggctgtcctcgggaaagtctgtctgcctatcgcgatcccaaaattaaaaat
tttatgcctgacccttctttattatgcgatatggatcgcgcggcagaaaggctggcaaag
gctgtctataagaaagagtctatcgtcatttttggcgattatgatgtcgatggagccact
tcatcggctttgatgattgatcttctgcgtcaattgggtgtgaatgccggttactatatt
cctgaccgtgtggcggaaggctatggccctgccgttcaatcgatgcgaaaattggccgaa
gaaggggctaatctggttgtgacggtcgattgcggcgcacaggcttatgaagcccttgag
gcagcaaaagaagccggtctagatgtggtggttgtcgatcatcaccaatgtcagcctcaa
ttaccagaggctcatgctgttgtgaatcctaaccgtctcgatgaagaagaaggcgcacaa
tatgggcatttggcagctgtcggcgtggcgtttttattagcggcggctttggtacggcat
ttgcggcgcgacggctatttttcggatagacccgaacccaaactgatggcgttacttgat
ttagttgccttgggaacagttgctgatgtcgcggcgttacatggcctcaacagagctttt
gtcgcgcagggcttaaaagttatggcggcgcggcatcgtcccggcattgccgctctattg
gatgttgcaggcgtttctcgtccgccgacgacatatgatcttggttttatattgggcccg
aggatcaatgccggtggacgggtcgggaaatctgatttgggtgtcaggttattgaccagt
cttgataaaaatgaatgtgagaatctggcactcgctttaaatcaattcaatctggaacga
cgatcgattgaacaaaccgtaaccgaagccgctgaaggcctatgtgaagagcaagttgaa
cggcctgtgatggttgtggcgggcgaaggatggcatcccggtgtgatcggcattgttgcg
ggtaggctaaagcaaaaatatgaccgccctattatcgtgattggtattgacgaggagggc
aacggaaaaggttctggacgttctttatcgggcgtcgatttgggcgccgcagtcttatca
gccaagcaagcggggctgttggtgaatggcggtggacatgccatggcagcaggtcttagc
atcaagaaagatcagatagaggattttgcgactttcatttccgagagagtccaaaaagat
gtcgaaacggctcgcgcgaataaagccttgttgattgatgaagttttaagcgctgggggt
atcaatttgtctttgattgaggctttggaggccggtggcccttatggagcggggtggccc
tcccctcatgtcgtggcggggcctgtatatgccattcagacacggatattaaaagagaag
catttgtcggttatttttaaaggacaagatgggcaaagctttaaagcgattgcctttaat
gcggtagagaccccaattacccaaatggtggtagcggcggggcgtgatcgcaagctatgg
gtggccggaaaaatccagttaaatgaatggaatggcagaaaggatgctcagcttcatatt
gaggatatcgcctgggcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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