KEGG   Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023: ZCP4_0909
Entry
ZCP4_0909         CDS       T02932                                 
Name
(GenBank) Excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
zmi  Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023
Pathway
zmi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:zmi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    ZCP4_0909
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:zmi03400]
    ZCP4_0909
DNA repair and recombination proteins [BR:zmi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ZCP4_0909
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      ZCP4_0909
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 UB2H SWI2_SNF2 DUF87 AAA_22 AAA_16 Microtub_bd Kinesin SRP54
Other DBs
NCBI-ProteinID: AHB10209
Position
complement(1005744..1007966)
AA seq 740 aa
MTIAIRTTLDEPENHSDFVPHRPSRPEKTEPSKPFRLVSDYEPAGDQPQAISALCKDIQK
GERDQVLLGVTGSGKTFTMAKVIEKLQRPSLILAPNKILAAQLYGEFKRFFPENAVEFFV
SYYDYYQPEAYVPRTDTYIEKDSAINEAIDRMRHAATRSLLEREDVIIVASVSCLYGIGS
VDTYSSMTFRLLKGQLVDQREIIRRLVALQYKRNEVAFGRGSFRVKGDTLEIFPSHYEDM
AWRISFFGDEIEEISEFDPLTGVKIAKLDQIKIYANSHYVTPEPTLKAANNAIRRELDNR
LREFKAEGKLLEAQRLEERTEFDLEMMAATGACSGIENYSRFLTGRAPGEPPPTLFEYLP
DNALLFVDESHQTIPQINGMSRGDYRRKTTLADYGFRLPSCIDNRPLRFEEWNAMRPQTV
YVSATPGPWELEQTGGVFVEQIIRPTGLVDPAIEVRPIEEQVDNLIFEAKKTAAAGWRSL
VTTLTKRMAEDLTEYMYEAGLKVRYMHSDVETIERIELIRDLRLGVYDVLIGINLLREGL
DIPECGLVAVLDADKEGFLRSETSLIQTIGRAARNAEGRVILYGDKITGSMARAMAETER
RRIKQIAWNKAHNITPATVKRQVDDIVGHFGVVNSSEAAATIENHDPKVLARSISETEKE
MLEAAANLEFEKAAQLRDVLHQLKRQELGLPPEKSSEIQGRSEAGRPGTRKTRSDKAREA
KASKRVKQEAGEKLLRSRGH
NT seq 2223 nt   +upstreamnt  +downstreamnt
atgactatcgcgatccgcacgacgcttgatgagccagaaaatcattccgattttgtgcct
catcgccccagccgccctgaaaaaacagagccgtcaaaaccgtttcgtcttgtttccgat
tacgagccagcgggcgatcagccgcaggccattagcgccttgtgtaaagatattcaaaaa
ggcgagcgggatcaggttctgttaggggtaaccggatccggtaagacctttaccatggca
aaagtcattgagaaattacagcgacctagtttgatattggcgcctaataaaattctggct
gcccagctttatggtgagtttaaacgctttttccctgaaaatgcggtcgaatttttcgtg
agctattacgattattatcagccggaagcctatgtgccgaggacggatacctatatcgaa
aaagatagcgccatcaatgaagcgatagaccgaatgcgccatgcggcaacgcgttcttta
ttagagcgtgaagatgttattatcgtggcctcggtttcttgtctttatggtatcggttcg
gttgatacctattcatccatgacctttcgtttattgaaaggtcaattggtcgatcagcgg
gaaattattcgccgtttggtcgctttacagtataagcgcaatgaagttgcctttggacga
ggttctttccgtgtcaaaggcgatacccttgagatattcccatcccattatgaagatatg
gcttggcgtatcagctttttcggggatgaaatcgaagaaatttctgaattcgatcctttg
actggggtaaaaatcgctaaactcgaccagattaaaatttatgctaattctcattatgtg
acaccagaaccgactttgaaggctgctaataatgcgatccggcgcgagttggacaaccgt
ttgcgggaattcaaagctgaaggtaaattactggaagcgcagcgattggaagagcgcacc
gaattcgatctggaaatgatggctgcaaccggtgcttgttccggtattgaaaattattcc
cgctttctgaccggacgcgcccccggagagccaccgcctactttatttgaatatctgcct
gataatgctttgttatttgtggatgaaagtcatcagacgattccgcaaattaacggtatg
tcacggggtgattatcgccgtaagacaactttggctgattatggcttccgcttgccttcc
tgtattgataaccgacctcttcggtttgaagaatggaatgcgatgcgtccgcaaaccgtc
tatgtttccgcaacgccgggaccatgggaattggagcaaactggcggcgtttttgtcgaa
cagattattcgaccgacggggctagttgatcctgcaatcgaagttcgaccgattgaagag
caggttgataatctgatctttgaagccaagaaaacggcagcagctggatggcgttctttg
gtgacgactttgaccaaaagaatggccgaggatttgactgaatatatgtatgaagcgggg
ttgaaagtccgttacatgcattccgatgtcgaaacgatcgaacgcatcgagcttattcgg
gatttgagattaggcgtttatgacgtcttgatcggtatcaacctgttgcgagaaggcttg
gatatcccagaatgtggattagtggccgtattagatgctgataaagaaggctttttgcgg
tctgaaacttcactgattcagacgatcggtcgagctgcgcgtaatgccgaagggcgtgtt
attttgtatggtgacaagataaccggttcgatggcgcgggctatggccgaaaccgaacgc
cgccggatcaagcagattgcctggaataaagcgcataatattacacctgcaacggttaag
cggcaggtcgatgatattgtcggtcatttcggtgttgtcaacagtagtgaggccgccgct
accatcgaaaatcatgatccgaaggttttggcacgttctatttccgagactgaaaaagaa
atgttagaagccgccgctaatttggaatttgaaaaagcggcacaattaagagatgtcttg
caccagttgaaaagacaggaattgggactgcctcctgaaaagtcgtctgagatccaaggt
cggtctgaagccggacgtcccggcactcgaaaaaccagaagtgacaaagctagagaagcc
aaggcttctaagcgcgtcaagcaagaagccggtgaaaaattattgagatcgcgagggcat
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (15)   
   Pfam (15)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system