KEGG   Zymomonas mobilis subsp. pomaceae ATCC 29192: Zymop_0976Help
Entry
Zymop_0976        CDS       T01556                                 

Definition
ribonuclease, Rne/Rng family
Orthology
K08300  
ribonuclease E [EC:3.1.26.12]
Organism
zmp  Zymomonas mobilis subsp. pomaceae ATCC 29192
Pathway
RNA degradation
Class
Genetic Information Processing; Folding, sorting and degradation; RNA degradation [PATH:zmp03018]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1143778..1146480
Genome map
AA seq 900 aa AA seqDB search
MTLTKMLIDARHREETRVAVIKGNRIEEFDFESAGRRQLKGNIYLAKVTRVEPSLQAAFV
DYGGNRQGFLAFSEIHPDYYQIPREDREALLREEEEYSARQNRQQETEDDEDTYESADSE
PSRNDTSEDSFENLRNRRRHFGRHHYRIQDVIRRRQVLLVQVVKEERGNKGAALTTYLSL
AGRYCVLMPNTSNGGGISRKISNLTDRKRLKAIMAELNLPSSMGCIVRTAGLQRTKSEIK
RDFDYLARLWDEIREKTLYSQAPALIYGDSDLIKRAIRDIYSREVDEILVEGSEGYQAAR
NFMRLLMPSHVRKVRPYADPAPLFQRFGVEQQLNAMYQPIVQLKSGGYLVINPTEALVSI
DINSGRSTREHNIEQTATATNLEAATEIARQLRLRDMAGLIVIDFIDMESSANVRRVEKA
MKDALKHDRARIQIGHISSFGLFEMSRQRLRTGMLEASTIPCPHCQGSGLMLTTPSSGLM
ALRMIEDEASRGNGSQIHVMMSLDSAIYVLNRKRKELGTIETLYGVTVLIDGDPLRGNNQ
ISVESAGPPPSHGLMLPPPLPTLSSDDSDEYEEEIEEEIEEIEEIEAEEIIEAPFRKNHR
QNMARREYARSEPPFKAENIEEEPEEFTSSVPETEEETGYDDDSEHNRRNRRSRRGRRGG
RRRNGEAIEKTAEFISETTEAEPIDLAPDYDLPKENHQPNLEPEVEVPTQQTSDVLEEEA
TEAPVARSKTRRRPRARPVKAEKAEEETTGASEMDEKGTSEARIATPKATDDKTSTAESK
TEEEDKAEEVKPKRVRKRTTTSRRKKAEPKKVDVSVEEKEEVKSDATEKASEKTTSPEVE
KPIETVKKEKPAEEVSKEATPSEEPKTASDKKAEETTPTSSDEGEKPAPRRGWWQRTFGE
NT seq 2703 nt NT seq  +upstreamnt  +downstreamnt
atgactctcacaaaaatgttgatcgacgcccgccaccgggaagaaactcgggtcgccgtc
atcaaaggtaaccgcattgaagaatttgattttgaatcagcaggccgccgtcaattaaaa
ggcaatatctatttagccaaggtgacgcgcgtcgaaccatcgcttcaggctgcttttgtc
gattatggcggaaatcgtcagggttttctggccttttcagaaattcaccctgactattat
caaatcccccgtgaagatcgggaagcccttttacgggaagaagaagaatattcggcgcgt
caaaatcgtcagcaagaaacggaagacgatgaagatacctatgaatctgcggattctgag
ccaagtagaaatgataccagcgaggatagtttcgaaaatttaagaaatcgccgccgtcat
tttgggcgtcatcattaccggattcaagatgttatccgtcgccgtcaagtgttgctggta
caagttgttaaggaagaacgcggcaataaaggcgctgcgcttactacctatctgtcttta
gcagggcgctactgtgtacttatgcccaataccagcaatggtgggggtatttcgcgtaaa
atttccaacttaactgatcgcaaaagattaaaagcgattatggcagaattaaatctgcca
agttcgatgggctgtatcgtccgtaccgcaggtttacagcggactaagagcgaaattaag
cgcgactttgattatcttgcccgattatgggatgaaattcgtgaaaagacgctttattct
caagcccctgccttaatctatggggacagtgatctgatcaaacgggctattcgcgacatc
tacagtcgggaagtcgatgagattctggtggaagggagtgaaggttatcaggccgcgcgt
aacttcatgcggttattgatgccaagccacgtccgaaaagtacgcccttatgcggaccct
gcccccttatttcagcgttttggcgttgagcaacagcttaatgctatgtatcagcctatc
gttcaattaaagtccggcggctatcttgtcattaatccaaccgaagcgttggtatcaatc
gatattaactctggccgatcaacccgcgaacataatatcgaacagacggcaacggcaacc
aatcttgaagcggccaccgaaattgcccgtcagctacggctgcgggatatggcgggcctg
atcgttattgatttcatcgatatggaatcaagtgcgaatgtccgacgggtcgaaaaggcg
atgaaagatgccttaaagcatgaccgtgctcggattcagattggccatatttctagtttt
ggtctgtttgaaatgagccgacagcgtctaagaaccggtatgctggaagcatcgacaatc
ccctgcccccattgtcagggttcgggcttaatgctgacgacaccttcttcgggcttgatg
gcgcttcgcatgattgaagatgaagcttctcgtggtaacgggagccaaattcatgtcatg
atgtcccttgattcggctatctatgtcttgaatcgtaaacgtaaagagctgggtaccatt
gaaaccctctatggtgttacggttttgattgatggtgatcctttacgcggtaataatcag
atttcagtagaatctgccggcccccctcccagccatggcttaatgttaccaccaccgctt
ccaacgctttcttctgatgatagcgatgaatatgaggaggaaatcgaggaagaaatcgaa
gagattgaagagatcgaggccgaagaaattatagaggcaccgttcagaaaaaatcatcgt
caaaatatggcgcgtcgtgaatatgcacgctctgaacccccgttcaaagctgaaaatatt
gaagaagagcctgaagaatttacgtcttctgttcccgaaacagaggaagaaacaggctat
gatgacgatagtgagcataatcggcggaatcgacgtagtcggcggggtcggcgcggtggc
cggcgtcgtaatggtgaagctatagaaaaaacggcagaattcatttctgaaactactgaa
gccgagccgattgatcttgcaccagactatgatttaccaaaagaaaatcatcagcctaat
cttgaaccagaagttgaggtgcctactcagcagacttcagatgtcttagaggaagaggct
accgaagcccccgtagcgcgcagcaaaacaaggcgtcgtccaagagcacgtccggtaaag
gccgagaaagccgaggaagaaaccacgggtgcttctgaaatggatgaaaagggtacatca
gaagctagaatcgctacgccaaaagctaccgatgacaaaacctcaacagcggaaagcaaa
actgaagaggaagataaagccgaagaggtaaagcccaagcgcgtaagaaaacgcacgaca
acgtcacgtcgtaaaaaggctgaaccgaaaaaggttgatgtctccgttgaggaaaaagaa
gaggttaagtctgatgctaccgaaaaagcatcagaaaaaacgacctctcctgaggtagaa
aaaccgatagaaacggtaaaaaaagaaaaaccggccgaggaagtttcaaaagaggcgacc
ccatcggaagagcctaaaacagcatccgataaaaaagccgaagagactacaccaacatct
tcagatgaaggtgaaaagcctgctcctcgtcgtggctggtggcaacgtacgtttggagaa
taa

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