KEGG   Zygosaccharomyces rouxii: ZYRO0C16016g
Entry
ZYRO0C16016g      CDS       T01118                                 
Name
(RefSeq) hypothetical protein
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
zro  Zygosaccharomyces rouxii
Pathway
zro03022  Basal transcription factors
zro03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:zro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    ZYRO0C16016g
  09124 Replication and repair
   03420 Nucleotide excision repair
    ZYRO0C16016g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zro03021]
    ZYRO0C16016g
   03400 DNA repair and recombination proteins [BR:zro03400]
    ZYRO0C16016g
Transcription machinery [BR:zro03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     ZYRO0C16016g
DNA repair and recombination proteins [BR:zro03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     ZYRO0C16016g
SSDB
Motif
Pfam: Tfb4 MIC19_MIC25 Rad50_zn_hook
Other DBs
NCBI-GeneID: 8203564
NCBI-ProteinID: XP_002496335
UniProt: C5DUE1
Position
C:1256628..1257656
AA seq 342 aa
MNFFEPFKQISEKSADDKKPIMDAISDPTFQPTKPRSHLAEETPSLLTVIVDTAPRLWAE
LDNERNQTGKIIDMLKSLLVFLNAHLAFNSSNQVAVIAAHSQGIKYLYPKSSSNQSNSLK
GKDLSIINNDMYRQFRNVDETLVEELYGLFQQEKEQADEVTQKSTLAGAMSAGLTYVNRV
SKELETISFKSRLLVVTCGSGGGRDEIFQYIPIMNCIFSATKLKCPIDVVKIGGSKESTF
LQQTTDATQGVYLHAESTEGLIQYLATAMFIDPSLRQIIVKPNQGSVDFRTSCYLTGKVV
AIGYICSVCLCVLSVSPPGNRCPACDSEFDERVISKFKRIKK
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgaacttcttcgaaccttttaaacagataagtgaaaagtctgcagatgataaaaagcct
atcatggatgccatttctgaccctacatttcaaccgactaaaccccgttcacatttagct
gaagaaacaccgtctctgttgacggtcattgtagatacagctccaagactttgggcggaa
ctggacaatgagagaaatcaaactggtaagataatcgatatgttaaaatcgctattagta
tttctaaatgcacacttggctttcaatagctctaatcaagtggcagtcattgcggcacat
tctcaaggaatcaaatatttatatccaaagagtagttccaatcaaagcaactctctcaaa
ggtaaggatctttcgattatcaacaatgacatgtaccgacagttcagaaatgtagacgaa
acgctggtcgaggaattatatggccttttccagcaggagaaagaacaagctgatgaagtt
acacaaaagagtactttagcaggcgctatgtctgcaggattaacatatgtgaatagagtt
tcgaaagaattagagacaatttcattcaaatcaagactactggtggttacatgtggtagt
ggtggtggtagagatgaaatctttcaatatattcccattatgaactgtatcttctcagct
actaaattgaaatgtcccatagatgtcgtaaagattggtggtagcaaagagagtacattt
ctacaacagactacagatgctactcagggtgtatacttacatgcggaatcaacagaggga
ctcatacagtatttggccactgcgatgttcattgatccatccttaagacaaattattgtt
aaaccaaaccaagggtctgtggattttagaacctcatgttatcttactggtaaagtggtg
gccattggttacatctgttcagtgtgtctatgtgttctatcagtgagtccaccaggtaat
agatgcccagcatgcgattctgaattcgatgaaagggtaatatcgaagtttaagagaatc
aaaaaatga

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