KEGG T01118: ZYRO0F11088g

Zygosaccharomyces rouxii: ZYRO0F11088g

Entry

ZYRO0F11088g CDS T01118

Definition

hypothetical protein

Orthology

K03144

transcription initiation factor TFIIH subunit 4

Organism

zro Zygosaccharomyces rouxii

Pathway

zro03022	Basal transcription factors
zro03420	Nucleotide excision repair

Module

zro_M00290

Holo-TFIIH complex

Class

Genetic Information Processing; Transcription; Basal transcription factors [PATH:zro03022]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:zro03420]

SSDB

Motif

Pfam:

Tfb2 Helicase_C_3 HTH_45

Other DBs

NCBI-GI:

254584224

NCBI-GeneID:

8205446

UniProt:

C5DY86

Position

F:906284..907813

AA seq 509 aa
MSSQHLLKSSVNQYLEELPQQIQSRLYESPATCLAIYRLLPQLAKFFIMSMVFNESAISL
RDLDRWVKSSGKLQFQDAIKSMKSLHLLIPVRSNGPMLIDLNHTFRESFKNALTGGEVSN
SFGIVMELDNDTVTTDMLDKYSADKWETILHFMVGTSLAHIPSENVLNLLKHSKLMEESN
TTGEFKITNEGFQFLLQEVNSQLWALLLQYLKMTEMLQMDPVDILNFIFMLGALEFSKPY
STNGLSETQKVMLKDMRDYGLVFQMNSNANVFYPTRLASMLTSDPKSIRGASGAMDSVLK
QNKEDVLNKSGGAGANADDDADEIGSEGQNMQDGALIVETNFKLYSYSNSPLQIAILSLF
VHMKSRFSNMVTGQLTRESIRQALLNGITADQIIAYLETHAHPQMRRMAEEQLEKRLELD
PNSKDPLQILPPTVVDQIKLWQLELDRIISFEGSLYSDFENHQEFTLLSSYAQDIGVLIW
KDDRKKKFFVSKEGNSQVLDYAKRKLKKK

NT seq 1530 nt +upstreamnt +downstreamnt
atgagttctcagcatctgttgaaaagttcagttaaccaatacttggaagaattaccgcag
caaattcagagtaggttatatgaatctcctgctacatgtttggccatctacaggctctta
cctcaactggcaaagttttttattatgtcaatggttttcaatgaaagtgctatttcactt
cgtgatttagataggtgggttaaatctagtggtaaacttcaatttcaggatgctatcaaa
tctatgaagtccctgcatctgcttataccagttagaagtaatggaccgatgcttattgat
ctgaaccatacctttagggagagttttaaaaatgcattgaccggaggtgaagtgagtaat
tctttcggtattgttatggaattggataatgacacagtcactactgatatgttggacaag
tattcagctgataagtgggaaactattttgcatttcatggtagggacatctctggcgcat
ataccgtctgaaaacgttttaaaccttttaaaacacagtaaattgatggaagagagtaac
acgacgggggaattcaaaatcactaatgaggggtttcaatttcttctacaggaagtaaac
tcacaactgtgggcacttcttctacaatatttaaaaatgacagaaatgttacagatggat
ccagtggatatattgaattttatctttatgttgggtgcattagagtttagcaaaccatat
agcactaatggattatcagagactcaaaaagtcatgttaaaggatatgagagattacggt
ttggttttccaaatgaattccaatgcgaatgtcttttatccaacacgattggcatcgatg
ttaacatctgatcccaagagtattagaggtgcttctggtgccatggatagtgttctaaaa
caaaataaagaagatgttcttaataaaagcggtggtgcaggtgccaatgcagatgacgat
gcagatgaaatcggttctgagggccagaatatgcaagacggtgcattgatcgtggagacg
aatttcaaactatattcgtattcgaattcacctttgcaaattgccattttgagtcttttc
gttcatatgaaatcaagattttccaatatggttactggtcaattgacaagagaatctatt
agacaagcattgctaaatggtattacagcagatcaaattattgcatatttagagacacac
gctcatccacagatgagaaggatggctgaggagcaattagagaaaagattggaattggat
ccgaatagtaaagatccgttacaaattttaccacctacggttgtagatcaaattaaattg
tggcaattggaattggatagaattattagtttcgaaggatcactttactctgattttgaa
aaccatcaggaattcaccttacttagctcctacgctcaggatattggcgttttaatatgg
aaggatgataggaagaagaaattcttcgtctctaaggaaggtaattctcaagttctcgat
tatgcaaagagaaagttgaagaagaaataa

All links

Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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