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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:adi03030]
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03410 Base excision repair [PATH:adi03410]
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03420 Nucleotide excision repair [PATH:adi03420]
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03430 Mismatch repair [PATH:adi03430]
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03440 Homologous recombination [PATH:adi03440]
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 B5T_01518 recJ; Single-stranded-DNA-specific exonuclease RecJ
B5T_02139 single-stranded DNA binding protein-like protein
B5T_03759 ssb; Single-stranded DNA-binding protein
B5T_00003 recF; DNA replication and repair protein recF
B5T_01540 recO; DNA repair protein recO
B5T_03007 recR; Recombination protein recR
B5T_03101 recA; Recombinase A
B5T_04329 polA; DNA polymerase I superfamily
B5T_03232 ruvA; Holliday junction ATP-dependent DNA helicase ruvA
B5T_03231 ruvB; Holliday junction ATP-dependent DNA helicase ruvB
B5T_03233 ruvC; Crossover junction endodeoxyribonuclease ruvC
B5T_00150 recG; ATP-dependent DNA helicase RecG
B5T_03111 hypothetical protein
B5T_03148 recB; Exodeoxyribonuclease V, beta subunit
B5T_03147 recC; Exodeoxyribonuclease V, gamma subunit
B5T_03149 recD; Exodeoxyribonuclease V alpha chain
B5T_01936 dnaE; DNA polymerase III, alpha subunit subfamily, putative
B5T_00002 dnaN; DNA polymerase III, beta subunit
B5T_03009 dnaX; DNA polymerase III, gamma and tau subunits
B5T_01086 holA; DNA polymerase III, delta subunit
B5T_02725 holB; DNA polymerase III, delta prime subunit
B5T_00880 Exonuclease superfamily
B5T_02366 dnaQ; DNA polymerase III, epsilon subunit
B5T_03684 holC; DNA polymerase III, chi subunit superfamily
B5T_03988 priA; Replication restart DNA helicase PriA
B5T_00791 priB; Primosomal replication protein N
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:adi03000]
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03021 Transcription machinery [BR:adi03021]
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03019 Messenger RNA biogenesis [BR:adi03019]
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03041 Spliceosome
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03011 Ribosome [BR:adi03011]
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03009 Ribosome biogenesis [BR:adi03009]
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03016 Transfer RNA biogenesis [BR:adi03016]
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03012 Translation factors [BR:adi03012]
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03110 Chaperones and folding catalysts [BR:adi03110]
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04131 Membrane trafficking [BR:adi04131]
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04121 Ubiquitin system
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03051 Proteasome [BR:adi03051]
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03032 DNA replication proteins [BR:adi03032]
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03036 Chromosome and associated proteins [BR:adi03036]
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03400 DNA repair and recombination proteins [BR:adi03400]
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B5T_00446 ogt; Methylated-DNA-protein-cysteine methyltransferase ogt
B5T_00449 Methylated DNA-protein cysteine methyltransferase
B5T_00105 phrB; Deoxyribodipyrimidine photolyase family
B5T_01523 ung; Uracil-DNA glycosylase
B5T_00761 mutY; A/G-specific adenine glycosylase, putative
B5T_02968 nth; Endonuclease III
B5T_01391 Helicase c2
B5T_03477 MutT/nudix family protein/thiamine-phosphatepyrophosphorylase, putative
B5T_00188 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase
B5T_04091 Fused DNA-binding transcriptional dual regulator
B5T_00448 Transcriptional regulator
B5T_00016 tag; DNA-3-methyladenine glycosidase I
B5T_00215 mutM; Formamidopyrimidine-DNA glycosylase 2
B5T_02664 xthA; Exodeoxyribonuclease III
B5T_04236 Endonuclease V
B5T_01518 recJ; Single-stranded-DNA-specific exonuclease RecJ
B5T_01775 ligA; NAD-dependent DNA ligase LigA
B5T_04329 polA; DNA polymerase I superfamily
B5T_03762 uvrA; Excinuclease ABC, A subunit
B5T_01762 uvrB; excinuclease ABC subunit B
B5T_02033 uvrC; UvrABC system protein C
B5T_04373 uvrD; UvrD/REP helicase domain protein
B5T_03802 rpoB; DNA-directed RNA polymerase subunit beta
B5T_03801 rpoC; DNA-directed RNA polymerase subunit beta'
B5T_03770 rpoA; DNA-directed RNA polymerase, alpha subunit
B5T_00166 rpoZ; DNA-directed RNA polymerase subunit omega
B5T_01837 mfd; transcription-repair coupling factor
B5T_03134 mutS; DNA mismatch repair protein mutS
B5T_00772 mutL; DNA mismatch repair protein mutL
B5T_01202 xseA; Exodeoxyribonuclease 7 large subunit
B5T_00868 xseB; Exodeoxyribonuclease 7 small subunit
B5T_01936 dnaE; DNA polymerase III, alpha subunit subfamily, putative
B5T_00002 dnaN; DNA polymerase III, beta subunit
B5T_03684 holC; DNA polymerase III, chi subunit superfamily
B5T_01086 holA; DNA polymerase III, delta subunit
B5T_02725 holB; DNA polymerase III, delta prime subunit
B5T_00880 Exonuclease superfamily
B5T_02366 dnaQ; DNA polymerase III, epsilon subunit
B5T_03009 dnaX; DNA polymerase III, gamma and tau subunits
B5T_02139 single-stranded DNA binding protein-like protein
B5T_03759 ssb; Single-stranded DNA-binding protein
B5T_02150 Putative n6 adenine-specific dna methyltransferase protein
B5T_01249 DNA mismatch endonuclease Vsr
B5T_03148 recB; Exodeoxyribonuclease V, beta subunit
B5T_03147 recC; Exodeoxyribonuclease V, gamma subunit
B5T_03149 recD; Exodeoxyribonuclease V alpha chain
B5T_03101 recA; Recombinase A
B5T_03232 ruvA; Holliday junction ATP-dependent DNA helicase ruvA
B5T_03231 ruvB; Holliday junction ATP-dependent DNA helicase ruvB
B5T_03233 ruvC; Crossover junction endodeoxyribonuclease ruvC
B5T_03988 priA; Replication restart DNA helicase PriA
B5T_00791 priB; Primosomal replication protein N
B5T_02330 hypothetical protein
B5T_00796 radA; DNA repair protein radA
B5T_00003 recF; DNA replication and repair protein recF
B5T_00150 recG; ATP-dependent DNA helicase RecG
B5T_03111 hypothetical protein
B5T_01540 recO; DNA repair protein recO
B5T_03007 recR; Recombination protein recR
B5T_03876 recN; DNA repair protein RecN
B5T_00428 rdgC; Putative exonuclease, RdgC superfamily
B5T_03545 CRISPR-associated protein Cas1
B5T_00057 Putative ATPase family protein
B5T_02980 gyrA; DNA gyrase subunit A-like protein
B5T_00004 gyrB; DNA gyrase subunit B
B5T_01820 topA; DNA topoisomerase I
B5T_02378 dbh1; Histone-like bacterial DNA-binding protein
B5T_01010 fis; DNA-binding protein Fis
B5T_03198 ihfA; Integration host factor subunit alpha
B5T_02973 ihfB; Integration host factor subunit beta
B5T_03250 recQ1; ATP-dependent DNA helicase RecQ
B5T_00005 hns; DNA-binding protein H-NS
B5T_03341 dinP; DNA polymerase IV
B5T_01817 lexA; LexA repressor
B5T_02449 SOS cell division inhibitor SulA
B5T_02450 dinP; Nucleotidyltransferase/DNA polymerase involved in DNA repair
B5T_02452 Error-prone DNA polymerase 2
B5T_03100 recX; Regulatory protein recX
B5T_04194 rep; UvrD/REP helicase subfamily
B5T_01906 yoaA; putative ATP-dependent helicase
B5T_03277 nrdA; Ribonucleotide-diphosphate reductase subunit alpha
B5T_03278 nrdB; Ribonucleoside reductase, beta subunit
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K03546 sbcC; DNA repair protein SbcC/Rad50
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K15342 cas1; CRISP-associated protein Cas1
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03746 hns; DNA-binding protein H-NS
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14160 imuA; protein ImuA
K14161 imuB; protein ImuB
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03565 recX; regulatory protein
K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:adi03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Alloalcanivorax dieselolei