AHA_0604 sulfate-binding protein
       AHA_0606 cysT; sulfate/thiosulfate ABC transporter, permease protein CysT
       AHA_0607 cysW; sulfate/thiosulfate ABC transporter, permease protein CysW
       AHA_0608 cysA; sulfate/thiosulfate ABC transporter, ATP-binding protein
       AHA_2936 tauA; taurine ABC transporter, periplasmic binding protein
       AHA_2938 tauC; taurine uptake ABC transporter, permease protein
       AHA_2937 taurine ABC transporter, ATP-binding protein
       AHA_2939 alpha-ketoglutarate-dependent taurine dioxygenase
       AHA_3566 sulfate adenylyltransferase subunit 1
       AHA_3567 sulfate adenylyltransferase subunit 2
       AHA_3564 cysC; adenylylsulfate kinase
       AHA_3497 cysQ-2; 3'(2'),5'-bisphosphate nucleotidase
       AHA_0584 cysQ-1; 3'(2'),5'-bisphosphate nucleotidase
       AHA_3373 cysH; phosphoadenosine phosphosulfate reductase
       AHA_3371 sulfite reductase [NADPH] flavoprotein, alpha-component
       AHA_3372 cysI; sulfite reductase (NADPH) hemoprotein, beta-component
       AHA_2575 anaerobic sulfite reductase subunit A
       AHA_2576 anaerobic sulfite reductase subunit B
       AHA_2577 anaerobic sulfite reductase subunit C
       AHA_2763 cytochrome c553
       AHA_3285 TtrA
       AHA_3287 tetrathionate reductase, subunit B
       AHA_3286 tetrathionate reductase subunit C
       AHA_0106 thiosulfate sulfurtransferase GlpE
       AHA_0192 cysE; serine O-acetyltransferase
       AHA_3038 cysK; cysteine synthase A
       AHA_0489 metA; homoserine O-succinyltransferase
       AHA_0589 metB; O-succinylhomoserine (thiol)-lyase
       AHA_2184 AMP-binding protein

K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
K02046 cysU; sulfate/thiosulfate transport system permease protein
K02047 cysW; sulfate/thiosulfate transport system permease protein
K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
K15551 tauA; taurine transport system substrate-binding protein
K15552 tauC; taurine transport system permease protein
K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
K16950 asrA; anaerobic sulfite reductase subunit A
K16951 asrB; anaerobic sulfite reductase subunit B
K00385 asrC; anaerobic sulfite reductase subunit C
K17230 fccA; cytochrome subunit of sulfide dehydrogenase
K08357 ttrA; tetrathionate reductase subunit A
K08358 ttrB; tetrathionate reductase subunit B
K08359 ttrC; tetrathionate reductase subunit C
K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
K01738 cysK; cysteine synthase [EC:2.5.1.47]
K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]

       AHA_1197 ribonuclease Z, putative
       AHA_0749 ribonuclease T2 family
       AHA_3784 multifunctional CCA protein
       AHA_3447 gltX; glutamyl-tRNA synthetase
       AHA_3650 proS; prolyl-tRNA synthetase
       AHA_0682 ileS; isoleucyl-tRNA synthetase
       AHA_3247 leuS; leucyl-tRNA synthetase
       AHA_2233 metG; methionyl-tRNA synthetase
       AHA_1529 glnS; glutaminyl-tRNA synthetase
       AHA_4112 argS; arginyl-tRNA synthetase
       AHA_3369 lysS; lysyl-tRNA synthetase
       AHA_1521 aspS; aspartyl-tRNA synthetase
       AHA_3714 alaS; alanyl-tRNA synthetase
       AHA_0708 conserved hypothetical protein
       AHA_1486 asnS; asparaginyl-tRNA synthetase
       AHA_2327 thrS; threonyl-tRNA synthetase
       AHA_1868 serS; seryl-tRNA synthetase
       AHA_2756 cysS; cysteinyl-tRNA synthetase
       AHA_3702 valS; valyl-tRNA synthetase
       AHA_1760 hisS; histidyl-tRNA synthetase
       AHA_2323 pheS; phenylalanyl-tRNA synthetase, alpha subunit
       AHA_2322 pheT; phenylalanyl-tRNA synthetase, beta subunit
       AHA_0581 tyrS-1; tyrosyl-tRNA synthetase
       AHA_3117 tyrS-2; tyrosyl-tRNA synthetase
       AHA_0049 trpS-1; tryptophanyl-tRNA synthetase
       AHA_3183 trpS-2; tryptophanyl-tRNA synthetase
       AHA_0281 dtd; D-tyrosyl-tRNA(Tyr) deacylase
       AHA_2599 HIT family hydrolase
       AHA_3482 trmB; tRNA (guanine-N(7)-)-methyltransferase
       AHA_3034 conserved hypothetical protein, putative
       AHA_2680 truA; tRNA pseudouridine synthase A
       AHA_3301 tRNA pseudouridine synthase B
       AHA_0825 truD; tRNA pseudouridine synthase D
       AHA_1747 iscS; cysteine desulfurase IscS
       AHA_0264 Sua5/YciO/YrdC family protein
       AHA_0923 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase
       AHA_4280 trmE; tRNA modification GTPase TrmE
       AHA_4273 gidA; glucose-inhibited division protein A
       AHA_2224 selD; selenide, water dikinase
       AHA_3497 cysQ-2; 3'(2'),5'-bisphosphate nucleotidase
       AHA_0584 cysQ-1; 3'(2'),5'-bisphosphate nucleotidase
       AHA_4283 rnpA; ribonuclease P protein component
       AHA_2644 rnt; ribonuclease T
       AHA_4224 rph; ribonuclease PH
       AHA_0554 rnb; exoribonuclease II
       AHA_2205 rnd; ribonuclease D
       AHA_3532 2'-5' RNA ligase
       AHA_0950 ABC transporter, ATP-binding protein
       AHA_0128 glyQ; glycyl-tRNA synthetase, alpha subunit
       AHA_0127 glyS; glycyl-tRNA synthetase, beta subunit
       AHA_3535 glutamyl-Q tRNA(Asp) synthetase
       AHA_3773 ybaK/ebsC protein
       AHA_2106 YbaK/prolyl-tRNA synthetase domain protein
       AHA_3849 DNA-binding protein
       AHA_2814 tRNA-specific adenosine deaminase
       AHA_3675 dusA; tRNA-dihydrouridine synthase A
       AHA_3510 tRNA-dihydrouridine synthase B
       AHA_2208 tRNA-dihydrouridine synthase C
       AHA_3241 miaB; tRNA-I(6)A37 thiotransferase enzyme MiaB
       AHA_1519 putative methyltransferase
       AHA_1044 conserved hypothetical protein
       AHA_1518 methyltransferase, putative
       AHA_2380 SmtA protein
       AHA_3020 RNA methyltransferase, TrmH family, group 1
       AHA_4191 trmA; tRNA (uracil-5-)-methyltransferase
       AHA_0668 trmD; tRNA (guanine-N1)-methyltransferase
       AHA_0038 tRNA guanosine-2'-O-methyltransferase
       AHA_1745 RNA methyltransferase, TrmH family, group 1
       AHA_0188 RNA methyltransferase, TrmH family, group 2
       AHA_3669 SmtA protein
       AHA_1164 RNA pseudouridine synthase family protein
       AHA_0863 ribosomal large subunit pseudouridine synthase A
       AHA_2665 pseudouridine synthase Rlu family protein
       AHA_1465 ribosomal large subunit pseudouridine synthase A
       AHA_1415 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
       AHA_2305 tRNA s2C32 biosynthesis protein TtcA
       AHA_0133 conserved hypothetical protein
       AHA_1675 conserved hypothetical protein
       AHA_4022 conserved hypothetical protein
       AHA_4023 DsrF protein
       AHA_4024 intracellular sulfur oxidation protein DsrE
       AHA_2676 dissimilatory sulfite reductase, gamma subunit
       AHA_1749 iscA; iron-sulfur cluster assembly protein IscA
       AHA_0790 chain A, Ygfz Protein
       AHA_1871 tRNA-(ms[2]io[6]A)-hydroxylase
       AHA_1919 tRNA (5-aminomethyl-2-thiouridylate) methyltransferase
       AHA_1734 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase
       AHA_1816 exsB; exsB protein
       AHA_1817 radical activating enzyme
       AHA_1157 GTP cyclohydrolase I family protein
       AHA_0918 iron-sulfur cluster-binding protein
       AHA_2223 tRNA 2-selenouridine synthase
       AHA_1735 tgt; queuine tRNA-ribosyltransferase
       AHA_1695 thiI; thiamine biosynthesis/tRNA modification protein ThiI
       AHA_1207 tilS; tRNA(Ile)-lysidine synthetase
       AHA_3837 conserved hypothetical protein
       AHA_2201 glycoprotease family protein
       AHA_0831 gcp; O-sialoglycoprotein endopeptidase
       AHA_0920 conserved hypothetical protein
       AHA_4241 ThiF domain protein
       AHA_0702 rnr; ribonuclease R
       AHA_3299 polyribonucleotide nucleotidyltransferase

K00784 rnz; ribonuclease Z [EC:3.1.26.11]
K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
K01008 selD; selenide, water dikinase [EC:2.7.9.3]
K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
K03683 rnt; ribonuclease T [EC:3.1.13.-]
K00989 rph; ribonuclease PH [EC:2.7.7.56]
K01147 rnb; exoribonuclease II [EC:3.1.13.1]
K03684 rnd; ribonuclease D [EC:3.1.13.5]
K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
K06020 ettA; energy-dependent translational throttle protein EttA
K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
K07237 tusB; tRNA 2-thiouridine synthesizing protein B
K07236 tusC; tRNA 2-thiouridine synthesizing protein C
K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
K13628 iscA; iron-sulfur cluster assembly protein
K06980 ygfZ; tRNA-modifying protein YgfZ
K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
K12573 rnr; ribonuclease R [EC:3.1.13.1]
K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]