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KO |
09100 Metabolism
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09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:apm03030]
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03410 Base excision repair [PATH:apm03410]
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03420 Nucleotide excision repair [PATH:apm03420]
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03430 Mismatch repair [PATH:apm03430]
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03440 Homologous recombination [PATH:apm03440]
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HIMB5_00006690 DHHA1 domain-containing protein,DHH family protein
HIMB5_00006410 single stranded DNA-binding protein
HIMB5_00007100 DNA replication and repair protein RecO
HIMB5_00011520 DNA replication and repair protein RecR
HIMB5_00002330 RecA protein
HIMB5_00000560 DNA-directed DNA polymerase
HIMB5_00006490 nucleic acid-binding DEAD/DEAH box helicase with OB-fold domain protein
HIMB5_00005620 DNA-directed DNA polymerase III PolC
HIMB5_00013060 DNA polymerase III, beta subunit
HIMB5_00011540 DNA polymerase III, subunit gamma/tau
HIMB5_00013630 DNA polymerase III, delta subunit
HIMB5_00006580 hypothetical protein
HIMB5_00013770 DNA polymerase III, epsilon subunit
HIMB5_00000230 replication restart DNA helicase PriA
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:apm03000]
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03021 Transcription machinery [BR:apm03021]
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03019 Messenger RNA biogenesis [BR:apm03019]
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03041 Spliceosome
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03011 Ribosome [BR:apm03011]
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03009 Ribosome biogenesis [BR:apm03009]
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03016 Transfer RNA biogenesis [BR:apm03016]
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03012 Translation factors [BR:apm03012]
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03110 Chaperones and folding catalysts [BR:apm03110]
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04131 Membrane trafficking [BR:apm04131]
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04121 Ubiquitin system
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03051 Proteasome
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03032 DNA replication proteins [BR:apm03032]
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03036 Chromosome and associated proteins [BR:apm03036]
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03400 DNA repair and recombination proteins [BR:apm03400]
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HIMB5_00006800 O-6-methylguanine DNA methyltransferase
HIMB5_00009580 FAD-binding protein, DNA photolyase family,DNA photolyase
HIMB5_00014270 FAD-binding protein, DNA photolyase family
HIMB5_00001400 HhH-GPD superfamily base excision DNA repair protein
HIMB5_00013520 endonuclease III DNA-(apurinic or apyrimidinic site) lyase
HIMB5_00013130 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
HIMB5_00014180 FAD-binding protein, DNA photolyase family,Deoxyribodipyrimidine photo-lyase-like protein
HIMB5_00005280 uracil DNA glycosylase family protein
HIMB5_00001440 uracil-DNA glycosylase, family 4
HIMB5_00000710 HhH-GPD superfamily base excision DNA repair protein
HIMB5_00013090 formamidopyrimidine-DNA glycosylase Fpg
HIMB5_00006240 exodeoxyribonuclease III
HIMB5_00006690 DHHA1 domain-containing protein,DHH family protein
HIMB5_00002080 DNA ligase (NAD+)
HIMB5_00000560 DNA-directed DNA polymerase
HIMB5_00006400 excinuclease ABC, A subunit
HIMB5_00001720 excinuclease ABC, B subunit
HIMB5_00001690 excinuclease ABC, C subunit
HIMB5_00002100 UvrD/REP helicase
HIMB5_00007770 DNA-directed RNA polymerase, beta subunit
HIMB5_00007760 DNA-directed RNA polymerase, beta' subunit
HIMB5_00007480 DNA-directed RNA polymerase, alpha subunit
HIMB5_00004300 DNA-directed RNA polymerase, omega subunit
HIMB5_00011810 Exonuclease
HIMB5_00005620 DNA-directed DNA polymerase III PolC
HIMB5_00013060 DNA polymerase III, beta subunit
HIMB5_00013630 DNA polymerase III, delta subunit
HIMB5_00006580 hypothetical protein
HIMB5_00013770 DNA polymerase III, epsilon subunit
HIMB5_00011540 DNA polymerase III, subunit gamma/tau
HIMB5_00006410 single stranded DNA-binding protein
HIMB5_00002330 RecA protein
HIMB5_00000230 replication restart DNA helicase PriA
HIMB5_00006490 nucleic acid-binding DEAD/DEAH box helicase with OB-fold domain protein
HIMB5_00007100 DNA replication and repair protein RecO
HIMB5_00011520 DNA replication and repair protein RecR
HIMB5_00006420 DNA gyrase, A subunit
HIMB5_00012600 DNA topoisomerase IV subunit B
HIMB5_00007390 DNA topoisomerase I, bacterial
HIMB5_00004760 DNA-binding protein
HIMB5_00006930 DNA-binding protein
HIMB5_00011690 DNA-binding protein
HIMB5_00002270 DNA polymerase IV family protein,impB/mucB/samB family protein
HIMB5_00002280 Peptidase S24
HIMB5_00005780 SOS regulatory protein LexA
HIMB5_00004830 RecX family protein
HIMB5_00004360 ribonucleoside-diphosphate reductase, alpha subunit
HIMB5_00003060 hypothetical protein
HIMB5_00004370 Ribonucleotide reductase, small chain
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03553 recA; recombination protein RecA
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03502 umuC; DNA polymerase V
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:apm03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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