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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:app03030]
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03410 Base excision repair [PATH:app03410]
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03420 Nucleotide excision repair [PATH:app03420]
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03430 Mismatch repair [PATH:app03430]
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03440 Homologous recombination [PATH:app03440]
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 CAP2UW1_1039 single-stranded-DNA-specific exonuclease RecJ
CAP2UW1_0124 single-strand binding protein
CAP2UW1_1552 DNA repair protein RecO
CAP2UW1_0313 recombination protein RecR
CAP2UW1_4312 recA protein
CAP2UW1_1117 DNA polymerase I
CAP2UW1_4215 Holliday junction DNA helicase RuvA
CAP2UW1_4217 Holliday junction DNA helicase RuvB
CAP2UW1_4214 crossover junction endodeoxyribonuclease RuvC
CAP2UW1_0345 putative transcriptional regulator
CAP2UW1_4593 hypothetical protein
CAP2UW1_3453 ATP-dependent DNA helicase RecG
CAP2UW1_2414 exodeoxyribonuclease V, beta subunit
CAP2UW1_2415 exodeoxyribonuclease V, gamma subunit
CAP2UW1_0329 helicase, RecD/TraA family
CAP2UW1_2413 exodeoxyribonuclease V, alpha subunit
CAP2UW1_0948 DNA polymerase III, alpha subunit
CAP2UW1_0002 DNA polymerase III, beta subunit
CAP2UW1_0311 DNA polymerase III, subunits gamma and tau
CAP2UW1_3064 DNA polymerase III, delta subunit
CAP2UW1_2470 DNA polymerase III, delta prime subunit
CAP2UW1_3931 DNA polymerase III, epsilon subunit
CAP2UW1_0238 DNA polymerase III, epsilon subunit
CAP2UW1_3753 Exonuclease RNase T and DNA polymerase III
CAP2UW1_3136 DNA polymerase III, epsilon subunit
CAP2UW1_3150 Exonuclease RNase T and DNA polymerase III
CAP2UW1_2466 DNA polymerase III, epsilon subunit
CAP2UW1_4128 DNA polymerase III chi subunit HolC
CAP2UW1_0059 primosomal protein N'
CAP2UW1_2260 primosomal replication protein N
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:app03000]
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03021 Transcription machinery [BR:app03021]
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03019 Messenger RNA biogenesis [BR:app03019]
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03041 Spliceosome
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03011 Ribosome [BR:app03011]
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03009 Ribosome biogenesis [BR:app03009]
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03016 Transfer RNA biogenesis [BR:app03016]
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03012 Translation factors [BR:app03012]
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03110 Chaperones and folding catalysts [BR:app03110]
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04131 Membrane trafficking [BR:app04131]
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04121 Ubiquitin system [BR:app04121]
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03051 Proteasome [BR:app03051]
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03032 DNA replication proteins [BR:app03032]
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03036 Chromosome and associated proteins [BR:app03036]
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03400 DNA repair and recombination proteins [BR:app03400]
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CAP2UW1_3060 methylated-DNA/protein-cysteine methyltransferase
CAP2UW1_1485 methylated-DNA/protein-cysteine methyltransferase
CAP2UW1_3591 Deoxyribodipyrimidine photo-lyase
CAP2UW1_0682 Uracil-DNA glycosylase superfamily
CAP2UW1_4054 A/G-specific adenine glycosylase
CAP2UW1_2953 endonuclease III
CAP2UW1_0258 thiamine monophosphate synthase
CAP2UW1_2774 NUDIX hydrolase
CAP2UW1_2550 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
CAP2UW1_3149 deoxyribodipyrimidine photolyase-related protein
CAP2UW1_2658 phage SPO1 DNA polymerase-related protein
CAP2UW1_2097 HhH-GPD family protein
CAP2UW1_1486 transcriptional regulator, AraC family
CAP2UW1_2730 formamidopyrimidine-DNA glycosylase
CAP2UW1_0686 exodeoxyribonuclease III Xth
CAP2UW1_0813 exodeoxyribonuclease III Xth
CAP2UW1_1039 single-stranded-DNA-specific exonuclease RecJ
CAP2UW1_3629 DNA ligase, NAD-dependent
CAP2UW1_1117 DNA polymerase I
CAP2UW1_0126 excinuclease ABC, A subunit
CAP2UW1_2332 excinuclease ABC, B subunit
CAP2UW1_1558 excinuclease ABC, C subunit
CAP2UW1_0952 UvrD/REP helicase
CAP2UW1_3142 UvrD/REP helicase
CAP2UW1_3500 DNA-directed RNA polymerase, beta subunit
CAP2UW1_3499 DNA-directed RNA polymerase, beta' subunit
CAP2UW1_3468 DNA-directed RNA polymerase, alpha subunit
CAP2UW1_0931 DNA-directed RNA polymerase, omega subunit
CAP2UW1_1080 transcription-repair coupling factor
CAP2UW1_3318 DNA mismatch repair protein MutS
CAP2UW1_2811 DNA mismatch repair protein MutL
CAP2UW1_0122 exodeoxyribonuclease VII, large subunit
CAP2UW1_4103 exodeoxyribonuclease VII, small subunit
CAP2UW1_0948 DNA polymerase III, alpha subunit
CAP2UW1_0002 DNA polymerase III, beta subunit
CAP2UW1_4128 DNA polymerase III chi subunit HolC
CAP2UW1_3064 DNA polymerase III, delta subunit
CAP2UW1_2470 DNA polymerase III, delta prime subunit
CAP2UW1_3931 DNA polymerase III, epsilon subunit
CAP2UW1_0238 DNA polymerase III, epsilon subunit
CAP2UW1_3753 Exonuclease RNase T and DNA polymerase III
CAP2UW1_3136 DNA polymerase III, epsilon subunit
CAP2UW1_3150 Exonuclease RNase T and DNA polymerase III
CAP2UW1_2466 DNA polymerase III, epsilon subunit
CAP2UW1_0311 DNA polymerase III, subunits gamma and tau
CAP2UW1_0124 single-strand binding protein
CAP2UW1_4519 phage DNA methylase
CAP2UW1_2414 exodeoxyribonuclease V, beta subunit
CAP2UW1_2415 exodeoxyribonuclease V, gamma subunit
CAP2UW1_0329 helicase, RecD/TraA family
CAP2UW1_2413 exodeoxyribonuclease V, alpha subunit
CAP2UW1_4312 recA protein
CAP2UW1_4215 Holliday junction DNA helicase RuvA
CAP2UW1_4217 Holliday junction DNA helicase RuvB
CAP2UW1_4214 crossover junction endodeoxyribonuclease RuvC
CAP2UW1_0059 primosomal protein N'
CAP2UW1_2260 primosomal replication protein N
CAP2UW1_2649 DNA repair protein RadA
CAP2UW1_0345 putative transcriptional regulator
CAP2UW1_4593 hypothetical protein
CAP2UW1_3453 ATP-dependent DNA helicase RecG
CAP2UW1_1552 DNA repair protein RecO
CAP2UW1_0313 recombination protein RecR
CAP2UW1_0497 DNA repair protein RecN
CAP2UW1_3220 putative exonuclease RdgC
CAP2UW1_2255 CRISPR-associated protein Cas1
CAP2UW1_2193 CRISPR-associated protein Cas1
CAP2UW1_3561 protein of unknown function DUF853 NPT hydrolase putative
CAP2UW1_2904 DNA gyrase, A subunit
CAP2UW1_0003 DNA gyrase, B subunit
CAP2UW1_0127 histone family protein DNA-binding protein
CAP2UW1_0798 transcriptional regulator, Fis family
CAP2UW1_1215 integration host factor, alpha subunit
CAP2UW1_2898 integration host factor, beta subunit
CAP2UW1_3118 histone family protein DNA-binding protein
CAP2UW1_4713 hypothetical protein
CAP2UW1_4484 integration host factor, beta subunit
CAP2UW1_0364 ATP-dependent DNA helicase, RecQ family
CAP2UW1_0510 ATP-dependent DNA helicase RecQ
CAP2UW1_4135 histone family protein nucleoid-structuring protein H-NS
CAP2UW1_3691 DNA-directed DNA polymerase
CAP2UW1_2120 SOS-response transcriptional repressor, LexA
CAP2UW1_2122 conserved hypothetical protein
CAP2UW1_2887 DNA polymerase III, alpha subunit
CAP2UW1_4311 regulatory protein RecX
CAP2UW1_4290 UvrD/REP helicase
CAP2UW1_3275 helicase c2
CAP2UW1_1575 DEAD/DEAH box helicase domain protein
CAP2UW1_3372 DEAD/DEAH box helicase domain protein
CAP2UW1_1003 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K10800 SMUG1; single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04485 radA; DNA repair protein RadA/Sms
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K15342 cas1; CRISP-associated protein Cas1
K15342 cas1; CRISP-associated protein Cas1
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03530 hupB; DNA-binding protein HU-beta
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K05788 ihfB; integration host factor subunit beta
K05788 ihfB; integration host factor subunit beta
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03746 hns; DNA-binding protein H-NS
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14161 imuB; protein ImuB
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03565 recX; regulatory protein
K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:app03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Candidatus Accumulibacter regalis