09100 Metabolism
09120 Genetic Information Processing
09121 Transcription
09122 Translation
09123 Folding, sorting and degradation
09124 Replication and repair
03030 DNA replication [PATH:bae03030]
03410 Base excision repair [PATH:bae03410]
03420 Nucleotide excision repair [PATH:bae03420]
03430 Mismatch repair [PATH:bae03430]
03440 Homologous recombination [PATH:bae03440]
BATR1942_11540 putative single-strand DNA-specific exonuclease BATR1942_18525 single-strand DNA-binding protein BATR1942_16085 single-strand binding protein BATR1942_18630 recF; recombination protein F BATR1942_10945 recO; DNA repair protein RecO BATR1942_18715 recR; recombination protein RecR BATR1942_06270 recA; recombinase A BATR1942_12330 DNA polymerase I BATR1942_11605 ruvA; Holliday junction DNA helicase RuvA BATR1942_11600 ruvB; Holliday junction DNA helicase RuvB BATR1942_09725 crossover junction endodeoxyribonuclease RuvC BATR1942_05730 ATP-dependent DNA helicase RecG BATR1942_11465 putative exonuclease with DNA/RNA helicase motif BATR1942_12400 dnaE; DNA polymerase III DnaE BATR1942_06090 polC; DNA polymerase III PolC BATR1942_18620 DNA polymerase III subunit beta BATR1942_18705 DNA polymerase III subunits gamma and tau BATR1942_11090 holA; DNA polymerase III subunit delta BATR1942_18765 DNA polymerase III subunit delta' BATR1942_11280 DNA polymerase III subunit epsilon BATR1942_05650 primosome assembly protein PriA
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] K03111 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein K03629 recF; DNA replication and repair protein RecF K03584 recO; DNA repair protein RecO (recombination protein O) K06187 recR; recombination protein RecR K03553 recA; recombination protein RecA K02335 polA; DNA polymerase I [EC:2.7.7.7] K03550 ruvA; holliday junction DNA helicase RuvA K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
03450 Non-homologous end-joining [PATH:bae03450]
03460 Fanconi anemia pathway
09126 Chromosome
09125 Information processing in viruses
09130 Environmental Information Processing
09140 Cellular Processes
09150 Organismal Systems
09160 Human Diseases
09180 Brite Hierarchies
09181 Protein families: metabolism
09182 Protein families: genetic information processing
03000 Transcription factors [BR:bae03000]
03021 Transcription machinery [BR:bae03021]
03019 Messenger RNA biogenesis [BR:bae03019]
03041 Spliceosome
03011 Ribosome [BR:bae03011]
03009 Ribosome biogenesis [BR:bae03009]
03016 Transfer RNA biogenesis [BR:bae03016]
03012 Translation factors [BR:bae03012]
03110 Chaperones and folding catalysts [BR:bae03110]
04131 Membrane trafficking [BR:bae04131]
04121 Ubiquitin system [BR:bae04121]
03051 Proteasome [BR:bae03051]
03032 DNA replication proteins [BR:bae03032]
03036 Chromosome and associated proteins [BR:bae03036]
03400 DNA repair and recombination proteins [BR:bae03400]
BATR1942_04520 O6-alkylguanine DNA alkyltransferase BATR1942_16880 uracil-DNA glycosylase BATR1942_17265 3-methyladenine DNA glycosylase BATR1942_01885 YfhQ BATR1942_09030 endonuclease III BATR1942_15295 YvcI BATR1942_20725 MutT/Nudix family protein BATR1942_17700 hypothetical protein BATR1942_13095 YtkD BATR1942_20895 putative NTP pyrophosphohydrolase BATR1942_07450 putative deoxyuridine 5'-triphosphate pyrophosphatase BATR1942_18495 AdaA BATR1942_18490 methylated-DNA--protein-cysteine S-methyltransferase BATR1942_01615 putative DNA-modified purine glycosidase BATR1942_12325 formamidopyrimidine-DNA glycosylase BATR1942_18500 exodeoxyribonuclease III BATR1942_10875 endonuclease IV BATR1942_11540 putative single-strand DNA-specific exonuclease BATR1942_00840 ligA; NAD-dependent DNA ligase LigA BATR1942_12330 DNA polymerase I BATR1942_15455 uvrA; excinuclease ABC subunit A BATR1942_15460 excinuclease ABC subunit B BATR1942_12005 uvrC; excinuclease ABC subunit C BATR1942_14680 DNA 3'-5' helicase IV BATR1942_03565 putative ATP-dependent DNA helicase BATR1942_00835 ATP-dependent DNA helicase BATR1942_19145 rpoB; DNA-directed RNA polymerase subunit beta BATR1942_19150 DNA-directed RNA polymerase subunit beta' BATR1942_19330 DNA-directed RNA polymerase subunit alpha BATR1942_16540 DNA-directed RNA polymerase subunit delta BATR1942_05640 rpoZ; DNA-directed RNA polymerase subunit omega BATR1942_18885 transcription-repair coupling factor BATR1942_06325 DNA mismatch repair protein MutS BATR1942_12050 recombination and DNA strand exchange inhibitor protein BATR1942_06330 mutL; DNA mismatch repair protein BATR1942_10460 xseA; exodeoxyribonuclease VII large subunit BATR1942_10455 exodeoxyribonuclease VII small subunit BATR1942_12400 dnaE; DNA polymerase III DnaE BATR1942_06090 polC; DNA polymerase III PolC BATR1942_18620 DNA polymerase III subunit beta BATR1942_11090 holA; DNA polymerase III subunit delta BATR1942_18765 DNA polymerase III subunit delta' BATR1942_11280 DNA polymerase III subunit epsilon BATR1942_18705 DNA polymerase III subunits gamma and tau BATR1942_18525 single-strand DNA-binding protein BATR1942_16085 single-strand binding protein BATR1942_11465 putative exonuclease with DNA/RNA helicase motif BATR1942_06270 recA; recombinase A BATR1942_11605 ruvA; Holliday junction DNA helicase RuvA BATR1942_11600 ruvB; Holliday junction DNA helicase RuvB BATR1942_09725 crossover junction endodeoxyribonuclease RuvC BATR1942_05650 primosome assembly protein PriA BATR1942_02935 DNA ATP-dependent repair enzyme BATR1942_02930 DNA repair exonuclease BATR1942_19045 DNA repair protein RadA BATR1942_18630 recF; recombination protein F BATR1942_05730 ATP-dependent DNA helicase RecG BATR1942_10945 recO; DNA repair protein RecO BATR1942_18715 recR; recombination protein RecR BATR1942_10430 double strand breaks DNA repair and genetic recombination protein BATR1942_09015 recU; Holliday junction-specific endonuclease BATR1942_02925 ATP-dependent deoxyribonuclease subunit A BATR1942_02920 ATP-dependent helicase/deoxyribonuclease subunit B BATR1942_04435 ATP-dependent DNA ligase subunit BATR1942_04430 ligD; ATP-dependent DNA ligase BATR1942_18645 DNA gyrase subunit A BATR1942_18640 gyrB; DNA gyrase subunit B BATR1942_05855 DNA topoisomerase I BATR1942_09265 non-specific DNA-binding protein HBsu; signal recognition particle-like (SRP) component BATR1942_07860 putative HU-related DNA-binding protein; phage SPbeta BATR1942_09390 ATP-dependent DNA helicase BATR1942_08295 putative ATP-dependent nucleic acid helicase BATR1942_10245 DNA polymerase IV BATR1942_06955 LexA repressor BATR1942_01825 recX; recombination regulator RecX BATR1942_12055 hypothetical protein BATR1942_08930 putative ATP-dependent helicase BATR1942_09065 bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon BATR1942_06500 ribonucleotide-diphosphate reductase subunit alpha BATR1942_06505 nrdF; ribonucleotide-diphosphate reductase subunit beta BATR1942_12420 oligoribonuclease (nanoRNAse), 3',5'-bisphosphate nucleotidase
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K01520 dut; dUTP diphosphatase [EC:3.6.1.23] K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-] K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] K02335 polA; DNA polymerase I [EC:2.7.7.7] K03701 uvrA; excinuclease ABC subunit A K03702 uvrB; excinuclease ABC subunit B K03703 uvrC; excinuclease ABC subunit C K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] K03048 rpoE; DNA-directed RNA polymerase subunit delta K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] K03555 mutS; DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2 K03572 mutL; DNA mismatch repair protein MutL K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] K03111 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] K03553 recA; recombination protein RecA K03550 ruvA; holliday junction DNA helicase RuvA K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] K03546 sbcC; DNA repair protein SbcC/Rad50 K03547 sbcD; DNA repair protein SbcD/Mre11 K04485 radA; DNA repair protein RadA/Sms K03629 recF; DNA replication and repair protein RecF K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] K03584 recO; DNA repair protein RecO (recombination protein O) K06187 recR; recombination protein RecR K03631 recN; DNA repair protein RecN (Recombination protein N) K03700 recU; recombination protein U K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] K10979 ku; DNA end-binding protein Ku K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] K03168 topA; DNA topoisomerase I [EC:5.6.2.1] K03530 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] K02346 dinB; DNA polymerase IV [EC:2.7.7.7] K01356 lexA; repressor LexA [EC:3.4.21.88] K03565 recX; regulatory protein K02347 polX; DNA polymerase (family X) K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
03029 Mitochondrial biogenesis [BR:bae03029]
09183 Protein families: signaling and cellular processes
09185 Viral protein families
09184 RNA family
09190 Not Included in Pathway or Brite
KEGG Orthology (KO) - Bacillus atrophaeus KEGG Orthology (KO) - Bacillus atrophaeus