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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:bcm03030]
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03410 Base excision repair [PATH:bcm03410]
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03420 Nucleotide excision repair [PATH:bcm03420]
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03430 Mismatch repair [PATH:bcm03430]
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03440 Homologous recombination [PATH:bcm03440]
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 Bcenmc03_2134 single-stranded-DNA-specific exonuclease RecJ
Bcenmc03_2788 single-strand binding protein
Bcenmc03_1094 DNA repair protein RecO
Bcenmc03_1849 recombination protein RecR
Bcenmc03_2681 recA protein
Bcenmc03_3655 DNA polymerase I
Bcenmc03_0656 Holliday junction DNA helicase RuvA
Bcenmc03_0655 Holliday junction DNA helicase RuvB
Bcenmc03_0657 crossover junction endodeoxyribonuclease RuvC
Bcenmc03_0692 ATP-dependent DNA helicase RecG
Bcenmc03_1188 exodeoxyribonuclease V, beta subunit
Bcenmc03_1187 exodeoxyribonuclease V, gamma subunit
Bcenmc03_1189 exodeoxyribonuclease V, alpha subunit
Bcenmc03_2336 DNA polymerase III, alpha subunit
Bcenmc03_0002 DNA polymerase III, beta subunit
Bcenmc03_1851 DNA polymerase III, subunits gamma and tau
Bcenmc03_0623 DNA polymerase III, delta subunit
Bcenmc03_1915 DNA polymerase III, delta prime subunit
Bcenmc03_1255 DNA polymerase III, epsilon subunit
Bcenmc03_0966 DNA polymerase III, epsilon subunit
Bcenmc03_2007 DNA polymerase III, epsilon subunit
Bcenmc03_2470 DNA polymerase III chi subunit HolC
Bcenmc03_0127 primosomal protein N'
Bcenmc03_1896 primosomal replication protein N-like protein
Bcenmc03_7073 serine/threonine protein kinase
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04067 priC; primosomal replication protein N''
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03450 Non-homologous end-joining [PATH:bcm03450]
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:bcm03000]
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03021 Transcription machinery [BR:bcm03021]
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03019 Messenger RNA biogenesis [BR:bcm03019]
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03041 Spliceosome
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03011 Ribosome [BR:bcm03011]
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03009 Ribosome biogenesis [BR:bcm03009]
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03016 Transfer RNA biogenesis [BR:bcm03016]
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03012 Translation factors [BR:bcm03012]
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03110 Chaperones and folding catalysts [BR:bcm03110]
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04131 Membrane trafficking [BR:bcm04131]
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04121 Ubiquitin system [BR:bcm04121]
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03051 Proteasome [BR:bcm03051]
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03032 DNA replication proteins [BR:bcm03032]
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03036 Chromosome and associated proteins [BR:bcm03036]
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03400 DNA repair and recombination proteins [BR:bcm03400]
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Bcenmc03_4072 methylated-DNA--protein-cysteine methyltransferase
Bcenmc03_2584 methylated-DNA--protein-cysteine methyltransferase
Bcenmc03_2196 Deoxyribodipyrimidine photo-lyase
Bcenmc03_0501 uracil-DNA glycosylase
Bcenmc03_2786 DNA-3-methyladenine glycosylase
Bcenmc03_2808 A/G-specific adenine glycosylase
Bcenmc03_2350 endonuclease III
Bcenmc03_5966 helicase c2
Bcenmc03_0542 NUDIX hydrolase
Bcenmc03_3522 NUDIX hydrolase
Bcenmc03_4233 NUDIX hydrolase
Bcenmc03_6153 NUDIX hydrolase
Bcenmc03_2004 NUDIX hydrolase
Bcenmc03_1638 NUDIX hydrolase
Bcenmc03_2540 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
Bcenmc03_3171 transcriptional regulator, AraC family
Bcenmc03_2787 Uracil-DNA glycosylase superfamily
Bcenmc03_6057 phage SPO1 DNA polymerase-related protein
Bcenmc03_2062 phage SPO1 DNA polymerase-related protein
Bcenmc03_2096 DNA-3-methyladenine glycosylase II
Bcenmc03_3170 AlkA domain protein
Bcenmc03_4071 transcriptional regulator, AraC family
Bcenmc03_0227 DNA-3-methyladenine glycosylase I
Bcenmc03_2809 formamidopyrimidine-DNA glycosylase
Bcenmc03_2163 exodeoxyribonuclease III Xth
Bcenmc03_3121 exodeoxyribonuclease III Xth
Bcenmc03_2134 single-stranded-DNA-specific exonuclease RecJ
Bcenmc03_2044 DNA ligase, NAD-dependent
Bcenmc03_3655 DNA polymerase I
Bcenmc03_2790 excinuclease ABC, A subunit
Bcenmc03_6472 excinuclease ABC, A subunit
Bcenmc03_2234 excinuclease ABC, B subunit
Bcenmc03_1101 excinuclease ABC, C subunit
Bcenmc03_1420 UvrD/REP helicase
Bcenmc03_0319 DNA-directed RNA polymerase, beta subunit
Bcenmc03_0320 DNA-directed RNA polymerase, beta' subunit
Bcenmc03_0353 DNA-directed RNA polymerase, alpha subunit
Bcenmc03_0960 DNA-directed RNA polymerase, omega subunit
Bcenmc03_1968 transcription-repair coupling factor
Bcenmc03_2107 DNA mismatch repair protein MutS
Bcenmc03_0734 DNA mismatch repair protein MutL
Bcenmc03_2568 exodeoxyribonuclease VII, large subunit
Bcenmc03_3650 exodeoxyribonuclease VII, small subunit
Bcenmc03_2336 DNA polymerase III, alpha subunit
Bcenmc03_0002 DNA polymerase III, beta subunit
Bcenmc03_2470 DNA polymerase III chi subunit HolC
Bcenmc03_0623 DNA polymerase III, delta subunit
Bcenmc03_1915 DNA polymerase III, delta prime subunit
Bcenmc03_1255 DNA polymerase III, epsilon subunit
Bcenmc03_0966 DNA polymerase III, epsilon subunit
Bcenmc03_2007 DNA polymerase III, epsilon subunit
Bcenmc03_1851 DNA polymerase III, subunits gamma and tau
Bcenmc03_2788 single-strand binding protein
Bcenmc03_0010 DNA mismatch endonuclease Vsr
Bcenmc03_1188 exodeoxyribonuclease V, beta subunit
Bcenmc03_1187 exodeoxyribonuclease V, gamma subunit
Bcenmc03_1189 exodeoxyribonuclease V, alpha subunit
Bcenmc03_2681 recA protein
Bcenmc03_0656 Holliday junction DNA helicase RuvA
Bcenmc03_0655 Holliday junction DNA helicase RuvB
Bcenmc03_0657 crossover junction endodeoxyribonuclease RuvC
Bcenmc03_0127 primosomal protein N'
Bcenmc03_1896 primosomal replication protein N-like protein
Bcenmc03_7073 serine/threonine protein kinase
Bcenmc03_2057 DNA repair protein RadA
Bcenmc03_0692 ATP-dependent DNA helicase RecG
Bcenmc03_1094 DNA repair protein RecO
Bcenmc03_1849 recombination protein RecR
Bcenmc03_0713 DNA repair protein RecN
Bcenmc03_5879 putative exonuclease RdgC
Bcenmc03_6072 Ku protein
Bcenmc03_6073 DNA ligase D
Bcenmc03_0999 DNA gyrase, A subunit
Bcenmc03_0003 DNA gyrase, B subunit
Bcenmc03_6487 DNA topoisomerase
Bcenmc03_0084 histone family protein DNA-binding protein
Bcenmc03_0659 transcriptional regulator, Fis family
Bcenmc03_1458 integration host factor, alpha subunit
Bcenmc03_1007 integration host factor, beta subunit
Bcenmc03_0321 ATP-dependent DNA helicase RecQ
Bcenmc03_0231 histone family protein nucleoid-structuring protein H-NS
Bcenmc03_5567 histone family protein nucleoid-structuring protein H-NS
Bcenmc03_5060 histone family protein nucleoid-structuring protein H-NS
Bcenmc03_6790 histone family protein nucleoid-structuring protein H-NS
Bcenmc03_6525 histone family protein nucleoid-structuring protein H-NS
Bcenmc03_4746 histone family protein nucleoid-structuring protein H-NS
Bcenmc03_4282 histone family protein nucleoid-structuring protein H-NS
Bcenmc03_0263 histone family protein nucleoid-structuring protein H-NS
Bcenmc03_4633 histone family protein nucleoid-structuring protein H-NS
Bcenmc03_6589 histone family protein nucleoid-structuring protein H-NS
Bcenmc03_6755 histone family protein nucleoid-structuring protein H-NS
Bcenmc03_6929 histone family protein nucleoid-structuring protein H-NS
Bcenmc03_2160 DNA-directed DNA polymerase
Bcenmc03_1577 transcriptional repressor, LexA family
Bcenmc03_4331 DNA polymerase B region
Bcenmc03_2839 conserved hypothetical protein
Bcenmc03_2838 conserved hypothetical protein
Bcenmc03_2837 DNA polymerase III, alpha subunit
Bcenmc03_2680 regulatory protein RecX
Bcenmc03_3298 PHP domain protein
Bcenmc03_0163 UvrD/REP helicase
Bcenmc03_1819 helicase c2
Bcenmc03_3338 DEAD/H associated domain protein
Bcenmc03_0564 ribonucleoside-diphosphate reductase, alpha subunit
Bcenmc03_0565 Ribonucleoside-diphosphate reductase
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04067 priC; primosomal replication protein N''
K04485 radA; DNA repair protein RadA/Sms
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K02336 polB; DNA polymerase II [EC:2.7.7.7]
K14160 imuA; protein ImuA
K14161 imuB; protein ImuB
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03565 recX; regulatory protein
K02347 polX; DNA polymerase (family X)
K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:bcm03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Burkholderia orbicola