| |
KO |
 09100 Metabolism
|
|
|
 09120 Genetic Information Processing
|
|
|
09121 Transcription
|
|
|
09122 Translation
|
|
|
09123 Folding, sorting and degradation
|
|
|
09124 Replication and repair
|
03030 DNA replication [PATH:bip03030]
|
03410 Base excision repair [PATH:bip03410]
|
03420 Nucleotide excision repair [PATH:bip03420]
|
03430 Mismatch repair [PATH:bip03430]
|
03440 Homologous recombination [PATH:bip03440]
|
 Bint_0240 recJ; single-stranded-D-specific exonuclease RecJ
Bint_2062 ssb; single-stranded DNA-binding protein
Bint_0188 single-strand binding protein
Bint_2257 recF; putative recombinational DNA repair ATPase (RecF pathway)
Bint_1346 recO; putative D repair protein recO
Bint_0956 recR; recombination protein RecR
Bint_2133 recA; recombinase A
Bint_0812 polA; DNA polymerase I
Bint_0927 ruvA; Holliday junction DNA helicase RuvA
Bint_0169 ruvB; Holliday junction DNA helicase B
Bint_0314 ruvC; crossover junction endodeoxyribonuclease
Bint_2391 recG; RecG-like DNA helicase
Bint_1229 dnaE; DNA polymerase III, alpha subunit
Bint_0594 dnaN; DNA polymerase III beta (beta clamp) subunit
Bint_2779 dnaX; DNA polymerase III, gamma and tau subunits
Bint_2465 dnaC; DNA polymerase III delta prime subunit
Bint_2380 holA; D polymerase III, delta subunit
Bint_2500 priA; primosome assembly protein PriA
|
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
|
03450 Non-homologous end-joining
|
03460 Fanconi anemia pathway
|
|
|
09126 Chromosome
|
|
|
09125 Information processing in viruses
|
|
|
09130 Environmental Information Processing
|
|
|
09140 Cellular Processes
|
|
|
09150 Organismal Systems
|
|
|
09160 Human Diseases
|
|
|
09180 Brite Hierarchies
|
|
|
09181 Protein families: metabolism
|
|
|
09182 Protein families: genetic information processing
|
03000 Transcription factors [BR:bip03000]
|
03021 Transcription machinery [BR:bip03021]
|
03019 Messenger RNA biogenesis [BR:bip03019]
|
03041 Spliceosome
|
03011 Ribosome [BR:bip03011]
|
03009 Ribosome biogenesis [BR:bip03009]
|
03016 Transfer RNA biogenesis [BR:bip03016]
|
03012 Translation factors [BR:bip03012]
|
03110 Chaperones and folding catalysts [BR:bip03110]
|
04131 Membrane trafficking [BR:bip04131]
|
04121 Ubiquitin system
|
03051 Proteasome [BR:bip03051]
|
03032 DNA replication proteins [BR:bip03032]
|
03036 Chromosome and associated proteins [BR:bip03036]
|
03400 DNA repair and recombination proteins [BR:bip03400]
|
Bint_1182 ogt; methylated DNA-protein cysteine methyltransferase
Bint_0612 nth; endonuclease III
Bint_1803 DNA or RNA helicase of superfamily II
Bint_0490 putative nudix hydrolase
Bint_1436 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
Bint_1895 ung; uracil-DNA glycosylase
Bint_0872 alkA; 3-methyl-adenine D glycosylase I
Bint_0055 Formamidopyrimidine-D glycolase
Bint_0254 exodeoxyribonuclease
Bint_0240 recJ; single-stranded-D-specific exonuclease RecJ
Bint_2728 ligA; NAD-dependent DNA ligase LigA
Bint_0812 polA; DNA polymerase I
Bint_1439 uvrA; exinuclease ABC subunit A
Bint_1354 uvrB; excinuclease ABC, B subunit
Bint_1877 uvrC; Excinuclease ABC, C subunit
Bint_0048 ATP-dependent DNA helicase
Bint_2196 pcrA; ATP-dependent DNA helicase
Bint_2349 rpoB; DNA-directed RNA polymerase beta subunit
Bint_2348 rpoC; DNA-directed RNA polymerase beta' subunit
Bint_2523 rpoA; DNA-directed RNA polymerase alpha subunit
Bint_2871 hypothetical protein
Bint_2035 mfd; transcription-repair coupling factor
Bint_2159 mutS; DNA mismatch repair protein MutS
Bint_1892 D mismatch repair protein
Bint_1229 dnaE; DNA polymerase III, alpha subunit
Bint_0594 dnaN; DNA polymerase III beta (beta clamp) subunit
Bint_2380 holA; D polymerase III, delta subunit
Bint_2779 dnaX; DNA polymerase III, gamma and tau subunits
Bint_2465 dnaC; DNA polymerase III delta prime subunit
Bint_2062 ssb; single-stranded DNA-binding protein
Bint_0188 single-strand binding protein
Bint_2681 DNA mismatch endonuclease Vsr
Bint_2133 recA; recombinase A
Bint_0927 ruvA; Holliday junction DNA helicase RuvA
Bint_0169 ruvB; Holliday junction DNA helicase B
Bint_0314 ruvC; crossover junction endodeoxyribonuclease
Bint_2500 priA; primosome assembly protein PriA
Bint_1665 sbcD; putative exonuclease
Bint_0902 radA; DNA repair protein RadA
Bint_2257 recF; putative recombinational DNA repair ATPase (RecF pathway)
Bint_2391 recG; RecG-like DNA helicase
Bint_1346 recO; putative D repair protein recO
Bint_0956 recR; recombination protein RecR
Bint_1056 recN; D repair and genetic recombination protein
Bint_2897 addB; ATP-dependent nuclease subunit B
Bint_2030 gyrA; DNA gyrase subunit A
Bint_1772 gyrB; D Gyrase B subunit
Bint_0815 topA; DNA topoisomerase I
Bint_1160 lexA; LexA repressor
Bint_0166 recX; recombination regulator RecX
Bint_1224 dinG; helicase
Bint_1581 nrdA; ribonucleotide-diphosphate reductase alpha subunit
Bint_1580 nrdB; ribonucleoside-diphosphate reductase, beta subunit
Bint_1164 phosphoesterase, RecJ domain protein
|
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
|
03029 Mitochondrial biogenesis [BR:bip03029]
|
|
|
09183 Protein families: signaling and cellular processes
|
|
|
09185 Viral protein families
|
|
|
09184 RNA family
|
|
|
09190 Not Included in Pathway or Brite
|
KEGG Orthology (KO) - Brachyspira intermedia