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KO |
09100 Metabolism
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09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:bli03030]
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03410 Base excision repair [PATH:bli03410]
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03420 Nucleotide excision repair [PATH:bli03420]
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03430 Mismatch repair [PATH:bli03430]
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03440 Homologous recombination [PATH:bli03440]
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BL01127 recJ; RecJ exonuclease
BL00099 ssb; single-strand DNA-binding protein
BL02493 ywpH; Single-strand binding protein
BL00991 ssb; single-strand DNA-binding protein
BL00079 recF; DNA repair RecF
BL03675 recO; RecO
BL02359 recR; DNA repair protein RecR
BL05164 recA; multifunctional SOS repair regulator
BL00394 polA; DNA polymerase I
BL01144 ruvA; Holliday junction DNA helicase
BL01143 ruvB; Holliday junction DNA helicase
BL02311 recG; ATP-dependent DNA helicase
BL02037 yrrC; putative exodeoxyribonuclease V alpha subunit YrrC
BL00408 dnaE; DNA polymerase III (alpha subunit)
BL01234 polC; DNA polymerase III (alpha subunit)
BL00077 dnaN; DNA polymerase III (beta subunit)
BL02357 dnaX; DNA polymerase III (gamma and tau subunits)
BL02088 holA; DNA polymerase III clamp loader subunit, C-terminal
BL00541 holB; DNA polymerase III (delta' subunit)
BL02296 priA; primosomal replication factor Y (primosomal protein N')
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining [PATH:bli03450]
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:bli03000]
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03021 Transcription machinery [BR:bli03021]
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03019 Messenger RNA biogenesis [BR:bli03019]
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03041 Spliceosome
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03011 Ribosome [BR:bli03011]
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03009 Ribosome biogenesis [BR:bli03009]
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03016 Transfer RNA biogenesis [BR:bli03016]
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03012 Translation factors [BR:bli03012]
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03110 Chaperones and folding catalysts [BR:bli03110]
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04131 Membrane trafficking [BR:bli04131]
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04121 Ubiquitin system [BR:bli04121]
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03051 Proteasome [BR:bli03051]
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03032 DNA replication proteins [BR:bli03032]
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03036 Chromosome and associated proteins [BR:bli03036]
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03400 DNA repair and recombination proteins [BR:bli03400]
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BL03537 ogt; O6-methylguanine DNA alkyltransferase
BL03895 ung; uracil-DNA glycosylase
BL05369 yxlJ; Methylpurine-DNA glycosylase (MPG)
BL03038 yfhQ; putative A/G-specific adenine glycosylase YfhQ
BL02743 nth; endonuclease III
BL03416 yvcI; NUDIX hydrolase
BL05395 putative Phosphohydrolase
BL03288 ytkD; putative hydrolase YtkD
BL01963 mutT; mutator protein
BL05281 adaA; methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family)
BL00477 adaB; O6-methylguanine-DNA methyltransferase
BL03090 yfjP; putative DNA glycosylase
BL00393 mutM; formamidopyrimidine-DNA glycosidase
BL03699 nfo; type IV apurinic/apyrimidinic endonuclease
BL01127 recJ; RecJ exonuclease
BL00589 ligA; DNA ligase
BL00394 polA; DNA polymerase I
BL03395 uvrA; excinuclease ABC (subunit A)
BL03394 uvrB; excinuclease ABC (subunit B)
BL00325 uvrC; excinuclease ABC (subunit C)
BL00588 pcrA; ATP-dependent DNA helicase
BL00699 yvgS; putative DNA helicase
BL02667 yjcD; putative ATP-dependent DNA helicase YjcD
BL02798 rpoB; RNA polymerase (beta subunit)
BL02626 rpoC; RNA polymerase (beta subunit)
BL01025 rpoA; RNA polymerase (alpha subunit)
BL05358 rpoE; RNA polymerase (delta subunit)
BL02294 rpoZ; RNA polymerase, omega subunit
BL00515 mfd; transcription-repair coupling factor
BL03663 mutS; MutS
BL00333 mutSB; DNA mismatch repair protein MutSB
BL03664 mutL; MutL
BL01526 xseA; Exonuclease VII, large subunit
BL01525 xseB; Exonuclease VII, small subunit
BL00408 dnaE; DNA polymerase III (alpha subunit)
BL01234 polC; DNA polymerase III (alpha subunit)
BL00077 dnaN; DNA polymerase III (beta subunit)
BL02088 holA; DNA polymerase III clamp loader subunit, C-terminal
BL00541 holB; DNA polymerase III (delta' subunit)
BL02357 dnaX; DNA polymerase III (gamma and tau subunits)
BL00099 ssb; single-strand DNA-binding protein
BL02493 ywpH; Single-strand binding protein
BL00991 ssb; single-strand DNA-binding protein
BL02037 yrrC; putative exodeoxyribonuclease V alpha subunit YrrC
BL05164 recA; multifunctional SOS repair regulator
BL01144 ruvA; Holliday junction DNA helicase
BL01143 ruvB; Holliday junction DNA helicase
BL02296 priA; primosomal replication factor Y (primosomal protein N')
BL01348 sbcC; ABC transporter, exonuclease SbcC
BL01349 sbcD; exonuclease SbcD
BL03262 radA; DNA repair protein RadA
BL00079 recF; DNA repair RecF
BL02311 recG; ATP-dependent DNA helicase
BL03675 recO; RecO
BL02359 recR; DNA repair protein RecR
BL01520 recN; RecN
BL02731 recU; RecU
BL01350 addA; ATP-dependent deoxyribonuclease (subunit A)
BL01351 addB; ATP-dependent deoxyribonuclease (subunit B)
BL03627 ykoV; Cytochrome c heme-binding site protein
BL03626 ykoU; ATP-dependent DNA ligase
BL00082 gyrA; DNA gyrase (subunit A)
BL00081 gyrB; DNA gyrase (subunit B)
BL01281 topA; DNA topoisomerase I
BL02787 hbs; non-specific DNA-binding protein HBsu signal recognition particle-like (SRP) component
BL01003 yqaK; DNA binding, phage related protein
BL01304 ATP-dependent DNA helicase
BL02232 recQ; Hypothetical ATP-dependent DNA helicase RecQ
BL01384 dinB1; UMUC-like DNA-repair protein DinB1
BL00801 uvrX; UV-damage repair protein UvrX
BL00127 lexA; transcriptional regulator
BL03621 hypothetical phagelike protein
BL03032 recX; conserved protein RecX
BL00334 yshC; putative DNA polymerase YshC
BL02749 dinG; ATP-dependent helicase
BL05232 ypvA; Probable ATP-dependent helicase
BL01192 nrdE; ribonucleoside-diphosphate reductase (major subunit)
BL01193 nrdF; ribonucleoside-diphosphate reductase (minor subunit)
BL00410 ytqI; YtqI
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03700 recU; recombination protein U
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K07455 recT; recombination protein RecT
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K01356 lexA; repressor LexA [EC:3.4.21.88]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K02347 polX; DNA polymerase (family X)
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:bli03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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