KEGG Orthology (KO) - Bifidobacterium animalis subsp. lactis DSM 10140

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
     03030 DNA replication [PATH:blt03030]
     03410 Base excision repair [PATH:blt03410]
     03420 Nucleotide excision repair [PATH:blt03420]
     03430 Mismatch repair [PATH:blt03430]
     03440 Homologous recombination [PATH:blt03440]
       Balat_0534 hypothetical protein
       Balat_1498 single-strand DNA-binding protein
       Balat_0003 recombination protein RecF
       Balat_1247 recO; DNA repair protein RecO
       Balat_0212 recombination protein recR
       Balat_1114 recA; recombinase A
       Balat_0821 holliday junction ATP-dependent DNA helicase ruvA
       Balat_0820 ruvB; Holliday junction DNA helicase B
       Balat_0822 ruvC; Holliday junction resolvase
       Balat_0260 RecG-like helicase
       Balat_1226 dnaE; DNA polymerase III subunit alpha
       Balat_0002 DNA polymerase III subunit beta
       Balat_0211 DNA polymerase III subunits gamma and tau
       Balat_0757 hypothetical protein
       Balat_0223 DNA polymerase III subunit delta
       Balat_1276 DNA polymerase III alpha subunit
       Balat_0633 primosome assembly protein PriA
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
     03450 Non-homologous end-joining
     03460 Fanconi anemia pathway
 
   09126 Chromosome
 
   09125 Information processing in viruses
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:blt03000]
     03021 Transcription machinery [BR:blt03021]
     03019 Messenger RNA biogenesis [BR:blt03019]
     03041 Spliceosome
     03011 Ribosome [BR:blt03011]
     03009 Ribosome biogenesis [BR:blt03009]
     03016 Transfer RNA biogenesis [BR:blt03016]
     03012 Translation factors [BR:blt03012]
     03110 Chaperones and folding catalysts [BR:blt03110]
     04131 Membrane trafficking [BR:blt04131]
     04121 Ubiquitin system [BR:blt04121]
     03051 Proteasome [BR:blt03051]
     03032 DNA replication proteins [BR:blt03032]
     03036 Chromosome and associated proteins [BR:blt03036]
     03400 DNA repair and recombination proteins [BR:blt03400]
       Balat_0112 methylated-DNA--protein-cysteinemethyltransferase
       Balat_0653 uracil-DNA glycosylase
       Balat_1345 A/G-specific adenine glycosylase
       Balat_1462 Putative EndoIII-related endonuclease
       Balat_0573 putative pyrophosphohydrolase
       Balat_1155 hypothetical protein
       Balat_0872 hypothetical protein
       Balat_1092 dUTPase
       Balat_1140 exodeoxyribonuclease
       Balat_0695 LigA
       Balat_0856 uvrA; excinuclease ABC subunit A
       Balat_0022 ABC transporter related protein
       Balat_0986 excinuclease ABC subunit B
       Balat_0855 excinuclease ABC subunit C
       Balat_0945 Superfamily I DNA and RNA helicase
       Balat_1257 DNA helicase II
       Balat_1333 ATP-dependent DNA helicase
       Balat_1343 rpoB; DNA-directed RNA polymerase subunit beta
       Balat_1342 DNA-directed RNA polymerase subunit beta
       Balat_0408 DNA-directed RNA polymerase subunit alpha
       Balat_0630 DNA-directed RNA polymerase subunit omega
       Balat_1021 transcription-repair coupling factor
       Balat_1316 Exonuclease VII large subunit
       Balat_1317 exonuclease VII, small subunit
       Balat_1226 dnaE; DNA polymerase III subunit alpha
       Balat_0002 DNA polymerase III subunit beta
       Balat_0757 hypothetical protein
       Balat_0223 DNA polymerase III subunit delta
       Balat_1276 DNA polymerase III alpha subunit
       Balat_0211 DNA polymerase III subunits gamma and tau
       Balat_0534 hypothetical protein
       Balat_1498 single-strand DNA-binding protein
       Balat_1300 Very short patch repair (Vsr endonuclease)
       Balat_1322 XorII very-short-patch-repair endonuclease
       Balat_1114 recA; recombinase A
       Balat_0821 holliday junction ATP-dependent DNA helicase ruvA
       Balat_0820 ruvB; Holliday junction DNA helicase B
       Balat_0822 ruvC; Holliday junction resolvase
       Balat_0633 primosome assembly protein PriA
       Balat_0418 DNA repair protein RadA
       Balat_0003 recombination protein RecF
       Balat_0260 RecG-like helicase
       Balat_1247 recO; DNA repair protein RecO
       Balat_0212 recombination protein recR
       Balat_0736 recN; DNA repair protein RecN
       Balat_1308 cas1; CRISPR-associated Cas1/Cas4 family protein
       Balat_0006 DNA gyrase subunit A
       Balat_1096 DNA topoisomerase IV subunit A
       Balat_0005 gyrB; DNA gyrase subunit B
       Balat_1102 DNA gyrase subunit B
       Balat_0221 DNA topoisomerase I
       Balat_0642 DNA-binding protein HB1
       Balat_0565 ATP-dependent DNA helicase RecQ
       Balat_0368 DNA-damage-inducible protein P
       Balat_0597 DNA-repair protein
       Balat_1212 LexA repressor
       Balat_1113 RecX-like protein
       Balat_1098 ATP-dependent helicase II
       Balat_0202 MutT1 protein
       Balat_0978 NTP pyrophosphohydrolase including oxidative damage repair enzyme
       Balat_0327 ribonucleotide-diphosphate reductase subunit alpha
       Balat_0326 nrdF; ribonucleotide-diphosphate reductase subunit beta
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K15342 cas1; CRISP-associated protein Cas1
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4]
K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
     03029 Mitochondrial biogenesis [BR:blt03029]
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: April 22, 2024