KEGG Orthology (KO) - Burkholderia multivorans ATCC 17616 (Tohoku)

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
     03030 DNA replication [PATH:bmj03030]
     03410 Base excision repair [PATH:bmj03410]
       BMULJ_02314 nth; endonuclease III-related protein
       BMULJ_00368 ung; uracil-DNA glycosylase
       BMULJ_02741 mutY; A/G-specific adenine glycosylase
       BMULJ_02742 mutM; formamidopyrimidine-DNA glycosylase
       BMULJ_00085 alkA; DNA-3-methyladenine glycosylase II
       BMULJ_02051 alkA; DNA-3-methyladenine glycosylase II
       BMULJ_03351 ada; methylated-DNA-[protein]-cysteine S-methyltransferase
       BMULJ_03110 tag; DNA-3-methyladenine glycosylase I
       BMULJ_06035 dpo; bacteriophage-type DNA polymerase
       BMULJ_02013 dpo; bacteriophage-type DNA polymerase
       BMULJ_00129 xthA; exodeoxyribonuclease III
       BMULJ_02129 xthA; exodeoxyribonuclease III
       BMULJ_03689 polA; DNA polymerase I
       BMULJ_02100 recJ; single-stranded-DNA-specific exonuclease
       BMULJ_01995 ligA; NAD-dependent DNA ligase
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
     03420 Nucleotide excision repair [PATH:bmj03420]
     03430 Mismatch repair [PATH:bmj03430]
     03440 Homologous recombination [PATH:bmj03440]
     03450 Non-homologous end-joining [PATH:bmj03450]
     03460 Fanconi anemia pathway
 
   09126 Chromosome
 
   09125 Information processing in viruses
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:bmj03000]
     03021 Transcription machinery [BR:bmj03021]
     03019 Messenger RNA biogenesis [BR:bmj03019]
     03041 Spliceosome
     03011 Ribosome [BR:bmj03011]
     03009 Ribosome biogenesis [BR:bmj03009]
     03016 Transfer RNA biogenesis [BR:bmj03016]
     03012 Translation factors [BR:bmj03012]
     03110 Chaperones and folding catalysts [BR:bmj03110]
     04131 Membrane trafficking [BR:bmj04131]
     04121 Ubiquitin system [BR:bmj04121]
     03051 Proteasome [BR:bmj03051]
     03032 DNA replication proteins [BR:bmj03032]
     03036 Chromosome and associated proteins [BR:bmj03036]
     03400 DNA repair and recombination proteins [BR:bmj03400]
       BMULJ_02524 ada; methylated-DNA-[protein]-cysteine S-methyltransferase
       BMULJ_03350 ada; methylated-DNA-[protein]-cysteine S-methyltransferase
       BMULJ_05675 phrB; deoxyribodipyrimidine photo lyase
       BMULJ_03823 phrB; deoxyribodipyrimidine photo lyase
       BMULJ_00368 ung; uracil-DNA glycosylase
       BMULJ_02741 mutY; A/G-specific adenine glycosylase
       BMULJ_02314 nth; endonuclease III-related protein
       BMULJ_04273 putative ATP-dependent DNA helicase
       BMULJ_00414 mutT; 7,8-dihydro-8-oxoguanine-triphosphatase
       BMULJ_01667 putative NUDIX hydrolase
       BMULJ_04405 NUDIX hydrolase
       BMULJ_01956 ADP-ribose pyrophosphatase
       BMULJ_05978 putative oxidative damage repair enzyme
       BMULJ_02480 dut; dUTP pyrophosphatase
       BMULJ_00084 ada; methylated-DNA-[protein]-cysteine S-methyltransferase
       BMULJ_05679 conserved hypothetical protein
       BMULJ_06035 dpo; bacteriophage-type DNA polymerase
       BMULJ_02013 dpo; bacteriophage-type DNA polymerase
       BMULJ_00085 alkA; DNA-3-methyladenine glycosylase II
       BMULJ_02051 alkA; DNA-3-methyladenine glycosylase II
       BMULJ_03351 ada; methylated-DNA-[protein]-cysteine S-methyltransferase
       BMULJ_03110 tag; DNA-3-methyladenine glycosylase I
       BMULJ_02742 mutM; formamidopyrimidine-DNA glycosylase
       BMULJ_00129 xthA; exodeoxyribonuclease III
       BMULJ_02129 xthA; exodeoxyribonuclease III
       BMULJ_02100 recJ; single-stranded-DNA-specific exonuclease
       BMULJ_01995 ligA; NAD-dependent DNA ligase
       BMULJ_03689 polA; DNA polymerase I
       BMULJ_05956 uvrA; excinuclease ABC subunit A
       BMULJ_02723 uvrA; excinuclease ABC subunit A
       BMULJ_02191 uvrB; excinuclease ABC subunit B
       BMULJ_01080 uvrC; excinuclease ABC subunit C
       BMULJ_01368 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA
       BMULJ_03013 rpoB; DNA-directed RNA polymerase, beta subunit
       BMULJ_03012 rpoC; DNA-directed RNA polymerase, beta' subunit
       BMULJ_02979 rpoA; DNA-directed RNA polymerase subunit alpha
       BMULJ_00836 rpoZ; DNA-directed RNA polymerase subunit omega
       BMULJ_01919 mfd; transcription-repair coupling factor
       BMULJ_02067 mutS; DNA mismatch repair protein
       BMULJ_00617 mutL; DNA mismatch repair protein
       BMULJ_02508 exodeoxyribonuclease VII
       BMULJ_03694 xseB; exodeoxyribonuclease VII small subunit
       BMULJ_02300 dnaE; DNA polymerase III alpha subunit
       BMULJ_00069 dnaN; DNA polymerase III, beta chain
       BMULJ_02429 holC; DNA polymerase III chi subunit
       BMULJ_00507 holA; DNA polymerase III delta subunit
       BMULJ_01861 holB; DNA polymerase III delta' subunit
       BMULJ_00847 dnaQ; DNA polymerase III epsilon subunit
       BMULJ_01207 dnaQ; DNA polymerase III epsilon subunit
       BMULJ_01797 dnaX; DNA polymerase III gamma and tau subunit
       BMULJ_05928 ssb; single-strand DNA-binding protein
       BMULJ_02721 ssb; single-strand DNA-binding protein
       BMULJ_00954 vsr; DNA mismatch endonuclease
       BMULJ_01156 recB; exodeoxyribonuclease V beta subunit
       BMULJ_01155 recC; exodeoxyribonuclease V gamma subunit
       BMULJ_01157 recD; exodeoxyribonuclease V alpha subunit
       BMULJ_02609 recA; recombination protein
       BMULJ_00543 ruvA; holliday junction DNA helicase
       BMULJ_00542 ruvB; holliday junction DNA helicase
       BMULJ_00544 ruvC; crossover junction endodeoxyribonuclease
       BMULJ_03153 priA; primosomal protein N'
       BMULJ_01842 priB; primosomal replication protein N
       BMULJ_02008 sms; DNA repair protein
       BMULJ_00576 recG; ATP-dependent DNA helicase
       BMULJ_05851 hypothetical protein
       BMULJ_01073 recO; DNA repair protein
       BMULJ_01795 recR; recombination protein
       BMULJ_00597 recN; DNA repair protein
       BMULJ_03808 superfamily II helicase
       BMULJ_06022 conserved hypothetical protein
       BMULJ_06021 putative ATP-dependent DNA ligase
       BMULJ_00975 gyrA; DNA gyrase subunit A
       BMULJ_00068 gyrB; DNA gyrase subunit B
       BMULJ_05562 putative topoisomerase IB
       BMULJ_00004 hupB; DNA-binding protein HU-beta
       BMULJ_01389 recT; recombination protein
       BMULJ_00546 fis; factor for inversion stimulation protein
       BMULJ_01467 himA; integration host factor alpha subunit
       BMULJ_00983 himD; integration host factor beta subunit
       BMULJ_03011 recQ; ATP-dependent DNA helicase
       BMULJ_03921 recQ; ATP-dependent DNA helicase
       BMULJ_05483 putative histone-like nucleoid-structuring protein H-NS
       BMULJ_05753 putative histone-like nucleoid-structuring protein H-NS
       BMULJ_05814 histone-like nucleoid-structuring protein H-NS
       BMULJ_05855 putative histone-like nucleoid-structuring protein H-NS
       BMULJ_06240 DNA-binding protein H-NS
       BMULJ_03106 putative histone-like nucleoid-structuring protein H-NS
       BMULJ_03074 putative histone-like nucleoid-structuring protein H-NS
       BMULJ_04712 putative histone-like nucleoid-structuring protein H-NS
       BMULJ_05246 putative histone-like nucleoid-structuring protein H-NS
       BMULJ_02126 dinB; DNA polymerase IV
       BMULJ_01605 lexA; repressor LexA
       BMULJ_03262 polB; DNA polymerase II
       BMULJ_02781 conserved hypothetical protein
       BMULJ_06292 conserved hypothetical protein
       BMULJ_02780 nucleotidyltransferase/DNA polymerase
       BMULJ_06293 nucleotidyltransferase/DNA polymerase
       BMULJ_06294 DNA polymerase
       BMULJ_02779 dnaE; DNA polymerase III alpha subunit
       BMULJ_02608 recX; regulatory protein
       BMULJ_04049 putative family X DNA polymerase IV
       BMULJ_04121 dpx; family X DNA polymerase
       BMULJ_03119 rep; ATP-dependent DNA helicase
       BMULJ_01763 dinG; ATP-dependent DNA helicase
       BMULJ_04092 lhr; ATP-dependent helicase
       BMULJ_05649 nrdA; ribonucleoside-diphosphate reductase alpha chain
       BMULJ_00448 nrdA; ribonucleoside-diphosphate reductase alpha chain
       BMULJ_00449 nrdB; ribonucleoside-diphosphate reductase beta chain
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04485 radA; DNA repair protein RadA/Sms
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4]
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K07455 recT; recombination protein RecT
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K02336 polB; DNA polymerase II [EC:2.7.7.7]
K14160 imuA; protein ImuA
K14160 imuA; protein ImuA
K14161 imuB; protein ImuB
K14161 imuB; protein ImuB
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03565 recX; regulatory protein
K02347 polX; DNA polymerase (family X)
K02347 polX; DNA polymerase (family X)
K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
     03029 Mitochondrial biogenesis [BR:bmj03029]
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: March 26, 2024