|
KO |
Eukaryotic type
|
|
|
Prokaryotic type
|
SSBR (single strand breaks repair)
|
DSBR (double strand breaks repair)
|
HR (homologous recombination)
|
RecBC pathway proteins
|
RecFOR pathway proteins
|
BUPH_03470 recombination protein RecA
BUPH_02756 radA; DNA repair protein RadA
BUPH_04311 ATP-dependent DNA helicase RecG
BUPH_02858 single-stranded-DNA-specific exonuclease
BUPH_03108 DNA repair protein RecO
BUPH_02279 recombination protein RecR
BUPH_04333 DNA repair protein RecN
BUPH_05214 recombination associated protein RdgC
BUPH_03516 holliday junction DNA helicase RuvA
BUPH_03517 holliday junction DNA helicase RuvB
BUPH_03515 crossover junction endodeoxyribonuclease RuvC
|
K03553 recA; recombination protein RecA
K04485 radA; DNA repair protein RadA/Sms
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
|
AddAB pathway proteins
|
Other HR factor
|
Archaeal homologous recombinant proteins
|
NHEJ (non-homologous end-joining)
|
Two-component NHEJ DNA repair complex
|
SHIIR (short-homology-independent illegitimate recombination)
|
SHDIR (short-homology-dependent illegitimate recombination)
|
RecET pathway
|
BUPH_02858 single-stranded-DNA-specific exonuclease
BUPH_03108 DNA repair protein RecO
BUPH_02279 recombination protein RecR
BUPH_02741 DNA ligase (NAD+)
|
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
|
Facilitator
|
Supressor
|
TLS (translesion DNA synthesis) factors
|
Other factors with a suspected DNA repair function
|