09100 Metabolism
09120 Genetic Information Processing
09121 Transcription
09122 Translation
09123 Folding, sorting and degradation
09124 Replication and repair
03030 DNA replication [PATH:cdh03030]
03410 Base excision repair [PATH:cdh03410]
03420 Nucleotide excision repair [PATH:cdh03420]
03430 Mismatch repair [PATH:cdh03430]
03440 Homologous recombination [PATH:cdh03440]
CDB402_2135 ssb1; single-stranded DNA-binding protein CDB402_1692 putative single-strand binding protein CDB402_0003 recF; recombination protein F CDB402_1602 recO; DNA repair protein RecO CDB402_0178 recR; recombination protein RecR CDB402_1360 recA; recombinase A CDB402_1033 polA1; DNA polymerase I CDB402_1273 ruvA; holliday junction DNA helicase RuvA CDB402_1272 ruvB; holliday junction DNA helicase RuvB CDB402_1274 ruvC; holliday junction resolvase CDB402_2145 putative DNA-binding protein CDB402_2159 putative transcriptional regulator CDB402_2160 hypothetical protein CDB402_1011 recG; ATP-dependent DNA helicase CDB402_1484 dnaE; DNA polymerase III subunit alpha CDB402_0002 dnaN; DNA polymerase III subunit beta CDB402_0176 dnaX; DNA polymerase III subunits gamma and tau CDB402_1657 DNA polymerase III, delta subunit CDB402_0255 DNA polymerase III delta prime subunit CDB402_0182 DNA polymerase III subunit epsilon CDB402_0952 DNA polymerase III subunit epsilon CDB402_1477 putative DNA polymerase III epsilon subunit CDB402_1228 priA; primosome assembly protein
K03111 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein K03629 recF; DNA replication and repair protein RecF K03584 recO; DNA repair protein RecO (recombination protein O) K06187 recR; recombination protein RecR K03553 recA; recombination protein RecA K02335 polA; DNA polymerase I [EC:2.7.7.7] K03550 ruvA; holliday junction DNA helicase RuvA K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
03450 Non-homologous end-joining
03460 Fanconi anemia pathway
09126 Chromosome
09125 Information processing in viruses
09130 Environmental Information Processing
09140 Cellular Processes
09150 Organismal Systems
09160 Human Diseases
09180 Brite Hierarchies
09181 Protein families: metabolism
09182 Protein families: genetic information processing
03000 Transcription factors [BR:cdh03000]
03021 Transcription machinery [BR:cdh03021]
03019 Messenger RNA biogenesis [BR:cdh03019]
03041 Spliceosome
03011 Ribosome [BR:cdh03011]
03009 Ribosome biogenesis [BR:cdh03009]
03016 Transfer RNA biogenesis [BR:cdh03016]
03012 Translation factors [BR:cdh03012]
03110 Chaperones and folding catalysts [BR:cdh03110]
04131 Membrane trafficking [BR:cdh04131]
04121 Ubiquitin system [BR:cdh04121]
03051 Proteasome [BR:cdh03051]
03032 DNA replication proteins [BR:cdh03032]
03036 Chromosome and associated proteins [BR:cdh03036]
03400 DNA repair and recombination proteins [BR:cdh03400]
CDB402_0076 putative riboflavin biosynthesis protein CDB402_1009 ung; uracil-DNA glycosylase CDB402_1826 mutY; A/G-specific adenine glycosylase CDB402_0227 nth; endonuclease III CDB402_0682 putative ATP-dependent DNA helicase CDB402_0893 NUDIX family hydrolase CDB402_1311 dut2; deoxyuridine 5'-triphosphate nucleotidohydrolase CDB402_0095 putative DNA repair protein CDB402_0265 putative alkylated DNA repair protein CDB402_0715 mug; TDG/mug DNA glycosylase family protein CDB402_0096 putative DNA-repair protein CDB402_2149 putative DNA repair glycosylase CDB402_1441 mutM; formamidopyrimidine-DNA glycosylase CDB402_0716 putative endonuclease CDB402_0545 exoA; putative exodeoxyribonuclease CDB402_1901 xthA; exodeoxyribonuclease III CDB402_0953 lig; DNA ligase CDB402_1033 polA1; DNA polymerase I CDB402_1046 uvrA; excinuclease ABC subunit A CDB402_1041 uvrB; excinuclease ABC subunit B CDB402_1218 uvrC; excinuclease ABC subunit C CDB402_0633 DNA helicase II / ATP-dependent DNA helicase PcrA CDB402_0636 uvrD; putative DNA helicase II CDB402_0722 pcrA; putative ATP-dependent DNA helicase II CDB402_0360 rpoB; DNA-directed RNA polymerase subunit beta CDB402_0361 rpoC; DNA-directed RNA polymerase subunit beta' CDB402_0458 rpoA; DNA-directed RNA polymerase subunit alpha CDB402_1231 rpoZ; DNA-directed RNA polymerase subunit omega CDB402_0790 mfd; transcription-repair coupling factor CDB402_0820 xseA; exodeoxyribonuclease VII large subunit CDB402_0819 xseB; exodeoxyribonuclease VII small subunit CDB402_1484 dnaE; DNA polymerase III subunit alpha CDB402_0002 dnaN; DNA polymerase III subunit beta CDB402_1657 DNA polymerase III, delta subunit CDB402_0255 DNA polymerase III delta prime subunit CDB402_0182 DNA polymerase III subunit epsilon CDB402_0952 DNA polymerase III subunit epsilon CDB402_1477 putative DNA polymerase III epsilon subunit CDB402_0176 dnaX; DNA polymerase III subunits gamma and tau CDB402_2135 ssb1; single-stranded DNA-binding protein CDB402_1692 putative single-strand binding protein CDB402_1360 recA; recombinase A CDB402_1273 ruvA; holliday junction DNA helicase RuvA CDB402_1272 ruvB; holliday junction DNA helicase RuvB CDB402_1274 ruvC; holliday junction resolvase CDB402_1228 priA; primosome assembly protein CDB402_1823 radA; DNA repair protein RadA CDB402_0003 recF; recombination protein F CDB402_2145 putative DNA-binding protein CDB402_2159 putative transcriptional regulator CDB402_2160 hypothetical protein CDB402_1011 recG; ATP-dependent DNA helicase CDB402_1602 recO; DNA repair protein RecO CDB402_0178 recR; recombination protein RecR CDB402_1092 DNA repair protein CDB402_0040 cas18; CRISPR-associated protein CDB402_0009 gyrA; DNA gyrase subunit A CDB402_0005 gyrB; DNA gyrase subunit B CDB402_0249 topA; DNA topoisomerase I CDB402_1492 dinX; DNA polymerase IV CDB402_1337 lexA; LexA repressor CDB402_0514 hypothetical protein CDB402_0522 dnaE2; error-prone DNA polymerase CDB402_1359 recombination regulator RecX CDB402_1724 dinG; putative ATP-dependent DNA helicase CDB402_0714 lhr; ATP-dependent helicase II CDB402_1004 hypothetical protein CDB402_1095 hypothetical protein CDB402_1733 nrdE; ribonucleotide-diphosphate reductase subunit alpha CDB402_1731 nrdF1; ribonucleotide-diphosphate reductase subunit beta CDB402_1790 nrdF2; ribonucleotide-diphosphate reductase subunit beta
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K01520 dut; dUTP diphosphatase [EC:3.6.1.23] K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] K02335 polA; DNA polymerase I [EC:2.7.7.7] K03701 uvrA; excinuclease ABC subunit A K03702 uvrB; excinuclease ABC subunit B K03703 uvrC; excinuclease ABC subunit C K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] K03111 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein K03553 recA; recombination protein RecA K03550 ruvA; holliday junction DNA helicase RuvA K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] K04485 radA; DNA repair protein RadA/Sms K03629 recF; DNA replication and repair protein RecF K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] K03584 recO; DNA repair protein RecO (recombination protein O) K06187 recR; recombination protein RecR K03631 recN; DNA repair protein RecN (Recombination protein N) K15342 cas1; CRISP-associated protein Cas1 K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] K03168 topA; DNA topoisomerase I [EC:5.6.2.1] K02346 dinB; DNA polymerase IV [EC:2.7.7.7] K01356 lexA; repressor LexA [EC:3.4.21.88] K14161 imuB; protein ImuB K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] K03565 recX; regulatory protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4] K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
03029 Mitochondrial biogenesis [BR:cdh03029]
09183 Protein families: signaling and cellular processes
09185 Viral protein families
09184 RNA family
09190 Not Included in Pathway or Brite
KEGG Orthology (KO) - Corynebacterium diphtheriae INCA 402 KEGG Orthology (KO) - Corynebacterium diphtheriae INCA 402