|
KO |
09100 Metabolism
|
|
|
09120 Genetic Information Processing
|
|
|
09121 Transcription
|
|
|
09122 Translation
|
|
|
09123 Folding, sorting and degradation
|
|
|
09124 Replication and repair
|
03030 DNA replication [PATH:chs03030]
|
03410 Base excision repair [PATH:chs03410]
|
03420 Nucleotide excision repair [PATH:chs03420]
|
03430 Mismatch repair [PATH:chs03430]
|
03440 Homologous recombination [PATH:chs03440]
|
CPS0A_0209 recJ; single-stranded-DNA-specific exonuclease
CPS0A_0451 ssb; single-strand binding family protein
CPS0A_0490 recF; recombination protein F
CPS0A_0178 recO; DNA repair protein RecO
CPS0A_0531 recR; recombination protein RecR
CPS0A_1078 recA; recombinase A
CPS0A_0138 ruvA; holliday junction DNA helicase
CPS0A_0447 ruvB; holliday junction DNA helicase
CPS0A_0137 ruvC; Holliday junction resolvase
CPS0A_0009 recB; exodeoxyribonuclease V subunit beta
CPS0A_0010 putative exodeoxyribonuclease V subunit gamma
CPS0A_1088 recD; exodeoxyribonuclease V subunit alpha
CPS0A_0710 exodeoxyribonuclease V subunit alpha
CPS0A_0087 dnaE; DNA polymerase III subunit alpha
CPS0A_0491 dnaN; DNA polymerase III subunit beta
CPS0A_0370 dnaX; DNA polymerase III subunits gamma and tau
CPS0A_0557 DNA polymerase III subunit
CPS0A_0454 DNA polymerase III subunit delta
CPS0A_0422 DNA polymerase III subunit epsilon
CPS0A_0101 DNA polymerase III subunit epsilon
CPS0A_0912 priA; putative primosome assembly protein
|
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
|
03450 Non-homologous end-joining
|
03460 Fanconi anemia pathway
|
|
|
09126 Chromosome
|
|
|
09125 Information processing in viruses
|
|
|
09130 Environmental Information Processing
|
|
|
09140 Cellular Processes
|
|
|
09150 Organismal Systems
|
|
|
09160 Human Diseases
|
|
|
09180 Brite Hierarchies
|
|
|
09181 Protein families: metabolism
|
|
|
09182 Protein families: genetic information processing
|
03000 Transcription factors [BR:chs03000]
|
03021 Transcription machinery [BR:chs03021]
|
03019 Messenger RNA biogenesis [BR:chs03019]
|
03041 Spliceosome
|
03011 Ribosome [BR:chs03011]
|
03009 Ribosome biogenesis [BR:chs03009]
|
03016 Transfer RNA biogenesis [BR:chs03016]
|
03012 Translation factors [BR:chs03012]
|
03110 Chaperones and folding catalysts [BR:chs03110]
|
04131 Membrane trafficking [BR:chs04131]
|
04121 Ubiquitin system
|
03051 Proteasome
|
03032 DNA replication proteins [BR:chs03032]
|
03036 Chromosome and associated proteins [BR:chs03036]
|
03400 DNA repair and recombination proteins [BR:chs03400]
|
CPS0A_0169 DNA-methyltransferase
CPS0A_1066 ung; uracil-DNA glycosylase
CPS0A_0271 DNA-3-methyladenine glycosylase
CPS0A_0431 mutY; putative A/G-specific adenine glycosylase
CPS0A_1008 putative DNA repair protein
CPS0A_0382 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
CPS0A_0014 endonuclease IV
CPS0A_0209 recJ; single-stranded-DNA-specific exonuclease
CPS0A_0668 ligA; NAD-dependent DNA ligase
CPS0A_0737 uvrA; excinuclease ABC subunit A
CPS0A_1042 uvrB; excinuclease ABC subunit B
CPS0A_0901 uvrC; excinuclease ABC subunit C
CPS0A_1067 pcrA; ATP-dependent DNA helicase
CPS0A_0752 rpoB; DNA-directed RNA polymerase subunit beta
CPS0A_0751 rpoC; DNA-directed RNA polymerase subunit beta
CPS0A_0131 rpoA; DNA-directed RNA polymerase subunit alpha
CPS0A_0946 mfd; transcription-repair coupling factor
CPS0A_0900 mutS; DNA mismatch repair protein
CPS0A_1030 mutL; DNA mismatch repair protein
CPS0A_0345 xseA; exodeoxyribonuclease VII large subunit
CPS0A_0344 exonuclease VII small subunit
CPS0A_0087 dnaE; DNA polymerase III subunit alpha
CPS0A_0491 dnaN; DNA polymerase III subunit beta
CPS0A_0454 DNA polymerase III subunit delta
CPS0A_0422 DNA polymerase III subunit epsilon
CPS0A_0101 DNA polymerase III subunit epsilon
CPS0A_0370 dnaX; DNA polymerase III subunits gamma and tau
CPS0A_0557 DNA polymerase III subunit
CPS0A_0451 ssb; single-strand binding family protein
CPS0A_0009 recB; exodeoxyribonuclease V subunit beta
CPS0A_0010 putative exodeoxyribonuclease V subunit gamma
CPS0A_1088 recD; exodeoxyribonuclease V subunit alpha
CPS0A_0710 exodeoxyribonuclease V subunit alpha
CPS0A_1078 recA; recombinase A
CPS0A_0138 ruvA; holliday junction DNA helicase
CPS0A_0447 ruvB; holliday junction DNA helicase
CPS0A_0137 ruvC; Holliday junction resolvase
CPS0A_0912 priA; putative primosome assembly protein
CPS0A_0376 radA; DNA repair protein
CPS0A_0490 recF; recombination protein F
CPS0A_0178 recO; DNA repair protein RecO
CPS0A_0531 recR; recombination protein RecR
CPS0A_0032 DNA topoisomerase IV subunit A
CPS0A_0555 gyrA; DNA gyrase subunit A
CPS0A_0033 DNA topoisomerase IV subunit B
CPS0A_0554 gyrB; DNA gyrase subunit B
CPS0A_1071 topA; DNA topoisomerase I/SWI domain fusion protein
CPS0A_0416 integration host factor alpha-subunit
CPS0A_0844 ribonucleoside-diphosphate reductase subunit alpha
CPS0A_0843 ribonucleotide reductase subunit beta
|
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K05788 ihfB; integration host factor subunit beta
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
|
03029 Mitochondrial biogenesis [BR:chs03029]
|
|
|
09183 Protein families: signaling and cellular processes
|
|
|
09185 Viral protein families
|
|
|
09184 RNA family
|
|
|
09190 Not Included in Pathway or Brite
|