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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:cmr03030]
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03410 Base excision repair [PATH:cmr03410]
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03420 Nucleotide excision repair [PATH:cmr03420]
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03430 Mismatch repair [PATH:cmr03430]
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03440 Homologous recombination [PATH:cmr03440]
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 Cycma_1083 single-stranded-DNA-specific exonuclease RecJ
Cycma_1755 single-strand binding protein
Cycma_0699 single-strand binding protein
Cycma_2339 DNA replication and repair protein recF
Cycma_0186 DNA repair protein recO
Cycma_0369 Recombination protein recR
Cycma_0495 Protein recA
Cycma_2089 DNA polymerase I
Cycma_0457 Holliday junction ATP-dependent DNA helicase ruvA
Cycma_2104 Holliday junction ATP-dependent DNA helicase ruvB
Cycma_3238 Crossover junction endodeoxyribonuclease ruvC
Cycma_1631 ATP-dependent DNA helicase RecG
Cycma_2050 DNA polymerase III, alpha subunit
Cycma_0652 DNA polymerase III, beta subunit
Cycma_4266 DNA polymerase III, delta subunit
Cycma_0801 DNA polymerase III gamma/tau subunit
Cycma_0330 Exonuclease RNase T and DNA polymerase III
Cycma_3567 DNA polymerase III, epsilon subunit
Cycma_1579 Exonuclease RNase T and DNA polymerase III
Cycma_4385 primosomal protein N'
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining [PATH:cmr03450]
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:cmr03000]
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03021 Transcription machinery [BR:cmr03021]
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03019 Messenger RNA biogenesis [BR:cmr03019]
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03041 Spliceosome
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03011 Ribosome [BR:cmr03011]
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03009 Ribosome biogenesis [BR:cmr03009]
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03016 Transfer RNA biogenesis [BR:cmr03016]
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03012 Translation factors [BR:cmr03012]
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03110 Chaperones and folding catalysts [BR:cmr03110]
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04131 Membrane trafficking [BR:cmr04131]
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04121 Ubiquitin system [BR:cmr04121]
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03051 Proteasome [BR:cmr03051]
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03032 DNA replication proteins [BR:cmr03032]
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03036 Chromosome and associated proteins [BR:cmr03036]
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03400 DNA repair and recombination proteins [BR:cmr03400]
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Cycma_0117 methylated-DNA/protein-cysteinemethyltransferase
Cycma_2272 DNA photolyase FAD-binding protein
Cycma_2880 DNA photolyase FAD-binding protein
Cycma_4395 Uracil-DNA glycosylase
Cycma_1754 A/G-specific adenine glycosylase
Cycma_2313 endonuclease III
Cycma_1796 S1/P1 nuclease
Cycma_4008 NUDIX hydrolase
Cycma_0463 NUDIX hydrolase
Cycma_3018 NUDIX hydrolase
Cycma_3423 NUDIX hydrolase
Cycma_0952 NUDIX hydrolase
Cycma_0448 Deoxyuridine 5'-triphosphate nucleotidohydrolase
Cycma_2882 deoxyribodipyrimidine photolyase-related protein
Cycma_1270 methyladenine glycosylase
Cycma_1799 exodeoxyribonuclease III
Cycma_1083 single-stranded-DNA-specific exonuclease RecJ
Cycma_4357 DNA ligase
Cycma_2089 DNA polymerase I
Cycma_2259 excinuclease ABC, A subunit
Cycma_1620 excinuclease ABC, A subunit
Cycma_1301 UvrABC system protein B
Cycma_1145 UvrABC system protein C
Cycma_2561 UvrD/REP helicase
Cycma_2582 DNA-directed RNA polymerase subunit beta
Cycma_2583 DNA-directed RNA polymerase subunit beta'
Cycma_2616 DNA-directed RNA polymerase subunit alpha
Cycma_1275 transcription-repair coupling factor
Cycma_2179 DNA mismatch repair protein mutS
Cycma_0929 MutS2 protein
Cycma_2511 DNA mismatch repair protein mutL
Cycma_4355 exodeoxyribonuclease VII, large subunit
Cycma_4356 Exonuclease VII small subunit
Cycma_2050 DNA polymerase III, alpha subunit
Cycma_0652 DNA polymerase III, beta subunit
Cycma_4266 DNA polymerase III, delta subunit
Cycma_0801 DNA polymerase III gamma/tau subunit
Cycma_0330 Exonuclease RNase T and DNA polymerase III
Cycma_3567 DNA polymerase III, epsilon subunit
Cycma_1579 Exonuclease RNase T and DNA polymerase III
Cycma_1755 single-strand binding protein
Cycma_0699 single-strand binding protein
Cycma_3993 D12 class N6 adenine-specific DNA methyltransferase
Cycma_0495 Protein recA
Cycma_0457 Holliday junction ATP-dependent DNA helicase ruvA
Cycma_2104 Holliday junction ATP-dependent DNA helicase ruvB
Cycma_3238 Crossover junction endodeoxyribonuclease ruvC
Cycma_4385 primosomal protein N'
Cycma_1028 SMC domain protein
Cycma_1027 nuclease SbcCD, D subunit
Cycma_2088 DNA repair protein RadA
Cycma_2339 DNA replication and repair protein recF
Cycma_1631 ATP-dependent DNA helicase RecG
Cycma_0186 DNA repair protein recO
Cycma_0369 Recombination protein recR
Cycma_2385 DNA repair protein RecN
Cycma_4280 protein of unknown function DUF853 NPT hydrolase
Cycma_1182 DNA repair protein
Cycma_1183 DNA ligase D
Cycma_4250 DNA gyrase, A subunit
Cycma_4977 DNA gyrase, B subunit
Cycma_4995 DNA topoisomerase
Cycma_3579 DNA topoisomerase I
Cycma_1753 histone family protein DNA-binding protein
Cycma_2795 ATP-dependent DNA helicase RecQ
Cycma_0661 ATP-dependent DNA helicase, RecQ family
Cycma_0400 ATP-dependent DNA helicase, RecQ family
Cycma_1162 ATP-dependent DNA helicase RecQ
Cycma_3053 DNA polymerase IV
Cycma_0114 DNA polymerase IV
Cycma_4957 DNA polymerase III, alpha subunit
Cycma_1304 Regulatory protein recX
Cycma_2816 PHP domain protein
Cycma_4848 DEAD/H associated domain protein
Cycma_2145 ribonucleoside-diphosphate reductase, alpha subunit
Cycma_2146 ribonucleotide reductase
Cycma_1673 phosphoesterase RecJ domain protein
Cycma_4019 phosphoesterase RecJ domain protein
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K05986 NUCS; nuclease S1 [EC:3.1.30.1]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03565 recX; regulatory protein
K02347 polX; DNA polymerase (family X)
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:cmr03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Cyclobacterium marinum