Messenger RNA Biogenesis - Culex quinquefasciatus (southern house mosquito)

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     KO
 Eukaryotic type
   mRNA processing factors
   mRNA surveillance and transport factors
     Transport factors
       EJC complex
       TREX complex
       TREX-2 complex
       Nuclear pore complex
       Ran-mediated transport factors
       eIF4F and regulatory proteins
         CpipJ_CPIJ012031 eukaryotic translation initiation factor 4e type
         CpipJ_CPIJ001547 DEAD box ATP-dependent RNA helicase
         CpipJ_CPIJ009979 eukaryotic translation initiation factor 4 gamma 3
         CpipJ_CPIJ002918 eukaryotic translation initiation factor 4 gamma
         CpipJ_CPIJ004849 eukaryotic translation initiation factor 4 gamma
         CpipJ_CPIJ017755 conserved hypothetical protein
         CpipJ_CPIJ007629 splicing factor
         CpipJ_CPIJ004808 Eukaryotic translation initiation factor 4E binding protein
         CpipJ_CPIJ016410 conserved hypothetical protein
         CpipJ_CPIJ003224 carbon catabolite repressor protein
         CpipJ_CPIJ019402 Fmr1
         CpipJ_CPIJ018855 specifically Rac-associated protein
         CpipJ_CPIJ000857 conserved hypothetical protein
         CpipJ_CPIJ007378 conserved hypothetical protein
         CpipJ_CPIJ009745 cytoplasmic polyadenylation element binding protein
         CpipJ_CPIJ009440 cytoplasmic polyadenylation element binding protein
         CpipJ_CPIJ014361 conserved hypothetical protein
         CpipJ_CPIJ001658 conserved hypothetical protein
         CpipJ_CPIJ007980 polyadenylate-binding protein 1
         CpipJ_CPIJ007218 conserved hypothetical protein
         CpipJ_CPIJ007219 polyadenylate-binding protein
         CpipJ_CPIJ013982 conserved hypothetical protein
         CpipJ_CPIJ002368 polyA-binding protein interacting protein
         CpipJ_CPIJ003293 antiviral helicase SKI2
         CpipJ_CPIJ007045 suppressin
         CpipJ_CPIJ011462 translation machinery-associated protein 20
         CpipJ_CPIJ013481 translation machinery-associated protein 20
         CpipJ_CPIJ009942 density-regulated protein
K03259 EIF4E; translation initiation factor 4E 
K03257 EIF4A; translation initiation factor 4A 
K03260 EIF4G; translation initiation factor 4G 
K03260 EIF4G; translation initiation factor 4G 
K03260 EIF4G; translation initiation factor 4G 
K03258 EIF4B; translation initiation factor 4B 
K24086 EIF4H; translation initiation factor 4H 
K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2 
K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter 
K18729 ANGEL; protein angel 
K15516 FMR; fragile X mental retardation protein 
K05749 CYFIP; cytoplasmic FMR1 interacting protein 
K13133 GEMIN5; gem associated protein 5 
K14283 TACC3; transforming acidic coiled-coil-containing protein 3 
K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
K02602 CPEB; cytoplasmic polyadenylation element-binding protein 
K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein 
K13126 PABPC; polyadenylate-binding protein 
K13126 PABPC; polyadenylate-binding protein 
K13126 PABPC; polyadenylate-binding protein 
K14322 PAIP1; polyadenylate-binding protein-interacting protein 1 
K27470 PAIP2; polyadenylate-binding protein-interacting protein 2 
K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] 
K23041 DEAF1; deformed epidermal autoregulatory factor 1 
K07575 MCTS; malignant T-cell-amplified sequence 
K07575 MCTS; malignant T-cell-amplified sequence 
K24272 DENR; density-regulated protein 
       APOBEC1-ACF complex
       Other transport factors
     Surveillance factors
     Factors involved in mRNA localization
     mRNA cycle factors
       Common to processing body (P body) and stress granule
         CpipJ_CPIJ007753 5'-3' exoribonuclease 1
         CpipJ_CPIJ006138 eukaryotic translation initiation factor 2C 2
         CpipJ_CPIJ009898 conserved hypothetical protein
         CpipJ_CPIJ014791 eukaryotic translation initiation factor 2C 2
         CpipJ_CPIJ012031 eukaryotic translation initiation factor 4e type
         CpipJ_CPIJ012300 nonsense-mediated mRNA decay protein 1
         CpipJ_CPIJ014361 conserved hypothetical protein
         CpipJ_CPIJ000753 DEAD-box ATP-dependent RNA helicase 8
         CpipJ_CPIJ010634 conserved hypothetical protein
         CpipJ_CPIJ007568 rap55
         CpipJ_CPIJ001978 conserved hypothetical protein
         CpipJ_CPIJ002248 Y-box binding protein
         CpipJ_CPIJ008699 limd1
         CpipJ_CPIJ001245 potentail helicase MOV-10
         CpipJ_CPIJ015648 DNA-binding protein smubp-2
         CpipJ_CPIJ001244 potentail helicase MOV-10
         CpipJ_CPIJ001251 potentail helicase MOV-10
         CpipJ_CPIJ001253 potentail helicase MOV-10
         CpipJ_CPIJ012615 DNA-binding protein smubp-2
         CpipJ_CPIJ001250 potentail helicase MOV-10
         CpipJ_CPIJ001252 potentail helicase MOV-10
         CpipJ_CPIJ015649 DNA-binding protein smubp-2
         CpipJ_CPIJ001246 potentail helicase MOV-10
         CpipJ_CPIJ001247 conserved hypothetical protein
         CpipJ_CPIJ001248 DNA-binding protein smubp-2
         CpipJ_CPIJ001249 conserved hypothetical protein
         CpipJ_CPIJ000096 importin beta-2
         CpipJ_CPIJ003189 serine/threonine-protein kinase Smg1
         CpipJ_CPIJ003187 conserved hypothetical protein
         CpipJ_CPIJ006427 smg-7
         CpipJ_CPIJ018772 conserved hypothetical protein
         CpipJ_CPIJ018734 conserved hypothetical protein
         CpipJ_CPIJ011213 RNA-binding protein lin-28
         CpipJ_CPIJ004120 huntingtin protein
         CpipJ_CPIJ005456 bicaudal-c
         CpipJ_CPIJ001612 heterogeneous nuclear ribonucleoprotein
         CpipJ_CPIJ002636 kinase
         CpipJ_CPIJ018257 cAMP-dependent protein kinase catalytic subunit
         CpipJ_CPIJ001096 lupus la ribonucleoprotein
         CpipJ_CPIJ012359 conserved hypothetical protein
K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K03259 EIF4E; translation initiation factor 4E 
K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] 
K18749 LSM14; protein LSM14 
K09276 YBX1; Y-box-binding protein 1 
K09276 YBX1; Y-box-binding protein 1 
K16682 AJUBA; LIM domain-containing protein 
K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
K18752 TNPO1; transportin-1 
K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
K11125 SMG5; protein SMG5 
K11124 SMG6; protein SMG6 [EC:3.1.-.-] 
K15308 TTP; tristetraprolin 
K18754 LIN28; protein lin-28 
K04533 HD; huntingtin 
K18756 BICC1; protein bicaudal C 
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
K04345 PKA; protein kinase A [EC:2.7.11.11] 
K04345 PKA; protein kinase A [EC:2.7.11.11] 
K18757 LARP1; la-related protein 1 
K23625 ATXN2_2L; ataxin 2/2L 
       P-body specific factors
       Stress granule specific factors
   mRNA degradation factors
 
 Prokaryotic type

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Last updated: April 9, 2024