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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:ctd03030]
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03410 Base excision repair [PATH:ctd03410]
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03420 Nucleotide excision repair [PATH:ctd03420]
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03430 Mismatch repair [PATH:ctd03430]
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03440 Homologous recombination [PATH:ctd03440]
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 CTDEC_0447 recJ; RecJ
CTDEC_0044 ssb; Single-strand DNA binding protein
CTDEC_0074 recF; RecF
CTDEC_0470 recO; RecO
CTDEC_0240 recR; RecR
CTDEC_0650 recA; Reca
CTDEC_0501 ruvA; RuvA
CTDEC_0040 ruvB; RuvB
CTDEC_0502 ruvC; RuvC
CTDEC_0639 recB; Exodeoxyribonuclease V beta chain
CTDEC_0640 recC; Exodeoxyribonuclease V gamma chain
CTDEC_0033 recD_1; Exodeoxyribonuclease V alpha chain
CTDEC_0652 recD_2; Exodeoxyribonuclease V alpha chain
CTDEC_0545 dnaE; DNA polymerase III alpha subunit
CTDEC_0075 dnaN; DNA polymerase III, beta chain
CTDEC_0187 dnaX_1; DNA polymerase III subunit gamma/tau
CTDEC_0334 dnaX_2; DNA polymerase III subunit gamma/tau
CTDEC_0047 DNA polymerase III, delta subunit
CTDEC_0261 dnaQ_1; DNA polymerase III, epsilon chain
CTDEC_0536 dnaQ_2; Exonuclease family protein
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:ctd03000]
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03021 Transcription machinery [BR:ctd03021]
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03019 Messenger RNA biogenesis [BR:ctd03019]
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03041 Spliceosome
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03011 Ribosome [BR:ctd03011]
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03009 Ribosome biogenesis [BR:ctd03009]
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03016 Transfer RNA biogenesis [BR:ctd03016]
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03012 Translation factors [BR:ctd03012]
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03110 Chaperones and folding catalysts [BR:ctd03110]
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04131 Membrane trafficking [BR:ctd04131]
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04121 Ubiquitin system
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03051 Proteasome
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03032 DNA replication proteins [BR:ctd03032]
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03036 Chromosome and associated proteins [BR:ctd03036]
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03400 DNA repair and recombination proteins [BR:ctd03400]
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CTDEC_0477 ada; O6-methylguanine-DNA methyltransferase
CTDEC_0607 ung; Uracil-DNA glycosylase
CTDEC_0107 mutY; A/G-specific adenine DNA glycosylase
CTDEC_0697 nth; Endonuclease III
CTDEC_0292 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase
CTDEC_0625 nfo; Endonuclease IV
CTDEC_0447 recJ; RecJ
CTDEC_0146 ligA; NAD-dependent DNA ligase
CTDEC_0333 uvrA; Excinuclease ABC subunit A
CTDEC_0586 uvrB; Excinuclease ABC subunit B
CTDEC_0791 uvrC; Excinuclease ABC subunit C
CTDEC_0608 pcrA; PcrA
CTDEC_0315 rpoB; DNA-directed RNA polymerase beta chain
CTDEC_0314 rpoC; DNA-directed RNA polymerase beta' chain
CTDEC_0507 rpoA; DNA-directed RNA polymerase alpha chain
CTDEC_0748 mfd; Transcription-repair coupling factor
CTDEC_0792 mutS; MutS
CTDEC_0575 mutL; MutL
CTDEC_0329 xseA; Exodeoxyribonuclease VII large subunit
CTDEC_0545 dnaE; DNA polymerase III alpha subunit
CTDEC_0075 dnaN; DNA polymerase III, beta chain
CTDEC_0047 DNA polymerase III, delta subunit
CTDEC_0261 dnaQ_1; DNA polymerase III, epsilon chain
CTDEC_0536 dnaQ_2; Exonuclease family protein
CTDEC_0187 dnaX_1; DNA polymerase III subunit gamma/tau
CTDEC_0334 dnaX_2; DNA polymerase III subunit gamma/tau
CTDEC_0044 ssb; Single-strand DNA binding protein
CTDEC_0639 recB; Exodeoxyribonuclease V beta chain
CTDEC_0640 recC; Exodeoxyribonuclease V gamma chain
CTDEC_0033 recD_1; Exodeoxyribonuclease V alpha chain
CTDEC_0652 recD_2; Exodeoxyribonuclease V alpha chain
CTDEC_0650 recA; Reca
CTDEC_0501 ruvA; RuvA
CTDEC_0040 ruvB; RuvB
CTDEC_0502 ruvC; RuvC
CTDEC_0298 radA; RadA
CTDEC_0074 recF; RecF
CTDEC_0470 recO; RecO
CTDEC_0240 recR; RecR
CTDEC_0189 gyrA_1; DNA gyrase subunit A
CTDEC_0660 gyrA_2; DNA gyrase subunit A
CTDEC_0190 gyrB; DNA gyrase subunit B
CTDEC_0661 gyrB_2; DNA gyrase subunit B
CTDEC_0643 topA; DNA topoisomerase I
CTDEC_0827 nrdA; Ribonucleoside-diphosphate reductase alpha chain
CTDEC_0828 nrdB; Ribonucleoside-diphosphate reductase beta chain
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:ctd03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Chlamydia trachomatis D-EC