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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:cthe03030]
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03410 Base excision repair [PATH:cthe03410]
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03420 Nucleotide excision repair [PATH:cthe03420]
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03430 Mismatch repair [PATH:cthe03430]
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03440 Homologous recombination [PATH:cthe03440]
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 Chro_4030 exonuclease RecJ
Chro_3095 putative exonuclease, RecJ
Chro_3902 single-strand binding protein
Chro_4066 single-strand binding protein
Chro_5742 single-strand binding protein
Chro_4070 DNA replication and repair protein RecF
Chro_0157 DNA replication and repair protein RecO
Chro_2779 DNA replication and repair protein RecR
Chro_1730 RecA protein
Chro_0681 Holliday junction DNA helicase subunit RuvA
Chro_0423 Holliday junction DNA helicase subunit RuvB
Chro_5349 Holliday junction endonuclease RuvC
Chro_1629 ATP-dependent DNA helicase RecG
Chro_5267 intein
Chro_5269 DNA polymerase III, alpha subunit
Chro_0092 DNA polymerase III, beta subunit
Chro_5907 DNA polymerase III, beta subunit
Chro_4891 DNA polymerase III, subunits gamma and tau
Chro_5908 DNA polymerase III, subunits gamma and tau
Chro_3898 DNA polymerase III, delta subunit
Chro_5913 DNA polymerase III, delta subunit
Chro_4980 DNA polymerase III, delta subunit
Chro_3899 DNA polymerase III subunit delta'
Chro_4863 DNA polymerase III, delta prime subunit
Chro_5914 DNA polymerase III, delta prime subunit
Chro_3362 replication restart DNA helicase PriA
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:cthe03000]
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03021 Transcription machinery [BR:cthe03021]
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03019 Messenger RNA biogenesis [BR:cthe03019]
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03041 Spliceosome
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03011 Ribosome [BR:cthe03011]
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03009 Ribosome biogenesis [BR:cthe03009]
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03016 Transfer RNA biogenesis [BR:cthe03016]
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03012 Translation factors [BR:cthe03012]
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03110 Chaperones and folding catalysts [BR:cthe03110]
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04131 Membrane trafficking [BR:cthe04131]
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04121 Ubiquitin system [BR:cthe04121]
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03051 Proteasome [BR:cthe03051]
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03032 DNA replication proteins [BR:cthe03032]
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03036 Chromosome and associated proteins [BR:cthe03036]
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03400 DNA repair and recombination proteins [BR:cthe03400]
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Chro_5097 deoxyribodipyrimidine photo-lyase family protein (cryptochrome)
Chro_4014 deoxyribodipyrimidine photo-lyase type I
Chro_5586 DNA-3-methyladenine glycosylase
Chro_4393 A/G-specific DNA-adenine glycosylase
Chro_2665 A/G-specific DNA-adenine glycosylase
Chro_1497 endonuclease III, DNA-(apurinic or apyrimidinic site) lyase
Chro_3340 mutator MutT protein
Chro_2325 NUDIX hydrolase
Chro_2524 NUDIX hydrolase
Chro_0044 NUDIX hydrolase
Chro_0475 methylated-DNA/protein-cysteinemethyltransferase
Chro_3158 deoxyribodipyrimidine photolyase-related protein
Chro_5488 G/U mismatch-specific uracil-DNA glycosylase
Chro_2991 phage SPO1 DNA polymerase-related protein
Chro_3159 HhH-GPD family protein
Chro_2109 DNA-(apurinic or apyrimidinic site) lyase, Formamidopyrimidine-DNA glycosylase
Chro_1894 Exodeoxyribonuclease III
Chro_2599 Endonuclease V
Chro_4030 exonuclease RecJ
Chro_3095 putative exonuclease, RecJ
Chro_2810 DNA ligase, NAD-dependent
Chro_5064 Excinuclease ABC subunit A
Chro_1485 Excinuclease ABC subunit B
Chro_5308 Excinuclease ABC subunit C
Chro_5156 UvrD/REP helicase
Chro_5456 ATP-dependent DNA helicase PcrA
Chro_0448 DNA-directed RNA polymerase subunit beta
Chro_0449 DNA-directed RNA polymerase gamma chain
Chro_0450 DNA-directed RNA polymerase subunit beta'
Chro_0172 DNA-directed RNA polymerase subunit alpha
Chro_4344 DNA-directed RNA polymerase, omega subunit
Chro_3003 transcription-repair coupling factor
Chro_1395 DNA mismatch repair protein MutS
Chro_2439 MutS2 family protein
Chro_1253 DNA mismatch repair protein MutL
Chro_1731 Exodeoxyribonuclease VII large subunit
Chro_1733 Exodeoxyribonuclease VII small subunit
Chro_5267 intein
Chro_5269 DNA polymerase III, alpha subunit
Chro_0092 DNA polymerase III, beta subunit
Chro_5907 DNA polymerase III, beta subunit
Chro_3898 DNA polymerase III, delta subunit
Chro_5913 DNA polymerase III, delta subunit
Chro_4980 DNA polymerase III, delta subunit
Chro_3899 DNA polymerase III subunit delta'
Chro_4863 DNA polymerase III, delta prime subunit
Chro_5914 DNA polymerase III, delta prime subunit
Chro_4891 DNA polymerase III, subunits gamma and tau
Chro_5908 DNA polymerase III, subunits gamma and tau
Chro_3902 single-strand binding protein
Chro_4066 single-strand binding protein
Chro_5742 single-strand binding protein
Chro_2728 DNA adenine methylase
Chro_1565 DNA adenine methylase
Chro_1730 RecA protein
Chro_0681 Holliday junction DNA helicase subunit RuvA
Chro_0423 Holliday junction DNA helicase subunit RuvB
Chro_5349 Holliday junction endonuclease RuvC
Chro_3362 replication restart DNA helicase PriA
Chro_2595 exonuclease SbcC
Chro_1870 Exodeoxyribonuclease I subunit D
Chro_4413 DNA repair protein RadA
Chro_4070 DNA replication and repair protein RecF
Chro_1629 ATP-dependent DNA helicase RecG
Chro_0157 DNA replication and repair protein RecO
Chro_2779 DNA replication and repair protein RecR
Chro_0771 DNA replication and repair protein RecN
Chro_3020 CRISPR-associated protein, Cas1 family
Chro_2652 DNA gyrase subunit A
Chro_0277 DNA topoisomerase IV subunit A
Chro_0312 DNA gyrase subunit B
Chro_1371 DNA topoisomerase I
Chro_4054 bacterial nucleoid protein Hbs
Chro_5413 ATP-dependent DNA helicase RecQ
Chro_4694 ATP-dependent DNA helicase RecQ
Chro_5848 DNA-directed DNA polymerase
Chro_5847 SOS response UmuD protein
Chro_3955 SOS-response transcriptional repressor, LexA
Chro_2590 hypothetical protein
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K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K15342 cas1; CRISP-associated protein Cas1
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03502 umuC; DNA polymerase V
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
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03029 Mitochondrial biogenesis [BR:cthe03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Chroococcidiopsis thermalis