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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:dac03030]
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03410 Base excision repair [PATH:dac03410]
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03420 Nucleotide excision repair [PATH:dac03420]
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03430 Mismatch repair [PATH:dac03430]
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03440 Homologous recombination [PATH:dac03440]
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 Daci_5406 single-stranded-DNA-specific exonuclease RecJ
Daci_0817 single-strand binding protein
Daci_4149 single-strand binding protein/Primosomal replication protein n
Daci_5259 DNA repair protein RecO
Daci_4901 recombination protein RecR
Daci_0874 recA protein
Daci_5325 DNA polymerase I
Daci_1226 Holliday junction DNA helicase RuvA
Daci_1227 Holliday junction DNA helicase RuvB
Daci_1480 crossover junction endodeoxyribonuclease RuvC
Daci_1011 ATP-dependent DNA helicase RecG
Daci_0521 exodeoxyribonuclease V, beta subunit
Daci_0520 exodeoxyribonuclease V, gamma subunit
Daci_0522 exodeoxyribonuclease V, alpha subunit
Daci_3501 DNA polymerase III, alpha subunit
Daci_0002 DNA polymerase III, beta subunit
Daci_4903 DNA polymerase III, subunits gamma and tau
Daci_6001 DNA polymerase III, delta subunit
Daci_3389 DNA-directed DNA polymerase
Daci_0097 DNA polymerase III, epsilon subunit
Daci_3993 DNA polymerase III, epsilon subunit
Daci_5959 Exonuclease RNase T and DNA polymerase III
Daci_3540 DNA polymerase III chi subunit HolC
Daci_0565 primosomal protein N'
Daci_5228 putative primosomal replication protein
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
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03450 Non-homologous end-joining [PATH:dac03450]
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:dac03000]
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03021 Transcription machinery [BR:dac03021]
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03019 Messenger RNA biogenesis [BR:dac03019]
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03041 Spliceosome
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03011 Ribosome [BR:dac03011]
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03009 Ribosome biogenesis [BR:dac03009]
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03016 Transfer RNA biogenesis [BR:dac03016]
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03012 Translation factors [BR:dac03012]
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03110 Chaperones and folding catalysts [BR:dac03110]
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04131 Membrane trafficking [BR:dac04131]
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04121 Ubiquitin system [BR:dac04121]
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03051 Proteasome [BR:dac03051]
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03032 DNA replication proteins [BR:dac03032]
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03036 Chromosome and associated proteins [BR:dac03036]
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03400 DNA repair and recombination proteins [BR:dac03400]
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Daci_3359 methylated-DNA--protein-cysteine methyltransferase
Daci_1577 Deoxyribodipyrimidine photo-lyase
Daci_0773 uracil-DNA glycosylase
Daci_5427 A/G-specific adenine glycosylase
Daci_2824 endonuclease III
Daci_5813 helicase c2
Daci_5494 NUDIX hydrolase
Daci_5757 NUDIX hydrolase
Daci_5102 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
Daci_2162 transcriptional regulator, AraC family
Daci_3795 2OG-Fe(II) oxygenase
Daci_5397 conserved hypothetical protein
Daci_0974 phage SPO1 DNA polymerase-related protein
Daci_2508 HhH-GPD family protein
Daci_2163 HhH-GPD family protein
Daci_1566 DNA-3-methyladenine glycosylase I
Daci_5429 formamidopyrimidine-DNA glycosylase
Daci_4997 exodeoxyribonuclease III
Daci_0339 exodeoxyribonuclease III Xth
Daci_5406 single-stranded-DNA-specific exonuclease RecJ
Daci_3592 DNA ligase, NAD-dependent
Daci_5325 DNA polymerase I
Daci_5952 excinuclease ABC, A subunit
Daci_0819 excinuclease ABC, A subunit
Daci_4001 excinuclease ABC, B subunit
Daci_2877 excinuclease ABC, C subunit
Daci_5331 UvrD/REP helicase
Daci_4163 UvrD/REP helicase
Daci_3778 UvrD/REP helicase
Daci_0510 DNA-directed RNA polymerase, beta subunit
Daci_0511 DNA-directed RNA polymerase, beta' subunit
Daci_1047 DNA-directed RNA polymerase, alpha subunit
Daci_2027 DNA-directed RNA polymerase, omega subunit
Daci_2848 transcription-repair coupling factor
Daci_2274 DNA mismatch repair protein MutS
Daci_5131 DNA mismatch repair protein MutL
Daci_3505 Exodeoxyribonuclease I
Daci_3573 exodeoxyribonuclease VII, large subunit
Daci_2240 Exonuclease VII small subunit
Daci_3501 DNA polymerase III, alpha subunit
Daci_0002 DNA polymerase III, beta subunit
Daci_3540 DNA polymerase III chi subunit HolC
Daci_6001 DNA polymerase III, delta subunit
Daci_3389 DNA-directed DNA polymerase
Daci_0097 DNA polymerase III, epsilon subunit
Daci_3993 DNA polymerase III, epsilon subunit
Daci_5959 Exonuclease RNase T and DNA polymerase III
Daci_4903 DNA polymerase III, subunits gamma and tau
Daci_0817 single-strand binding protein
Daci_4149 single-strand binding protein/Primosomal replication protein n
Daci_4704 D12 class N6 adenine-specific DNA methyltransferase
Daci_0521 exodeoxyribonuclease V, beta subunit
Daci_0520 exodeoxyribonuclease V, gamma subunit
Daci_0522 exodeoxyribonuclease V, alpha subunit
Daci_0874 recA protein
Daci_1226 Holliday junction DNA helicase RuvA
Daci_1227 Holliday junction DNA helicase RuvB
Daci_1480 crossover junction endodeoxyribonuclease RuvC
Daci_0565 primosomal protein N'
Daci_5228 putative primosomal replication protein
Daci_0894 SMC domain protein
Daci_0895 nuclease SbcCD, D subunit
Daci_0314 DNA repair protein RadA
Daci_1011 ATP-dependent DNA helicase RecG
Daci_5259 DNA repair protein RecO
Daci_4901 recombination protein RecR
Daci_5421 DNA repair protein RecN
Daci_3413 putative exonuclease RdgC
Daci_0024 putative exonuclease RdgC
Daci_1209 CRISPR-associated protein Cas1
Daci_3520 protein of unknown function DUF853 NPT hydrolase putative
Daci_4340 Ku protein
Daci_4339 DNA ligase D
Daci_4719 DNA gyrase, A subunit
Daci_0003 DNA gyrase, B subunit
Daci_4343 putative DNA topoisomerase, type I
Daci_2879 histone family protein DNA-binding protein
Daci_1916 RecT protein
Daci_1452 beta-lactamase domain protein
Daci_4610 integration host factor, alpha subunit
Daci_4725 integration host factor, beta subunit
Daci_0141 ATP-dependent DNA helicase RecQ
Daci_3717 histone family protein nucleoid-structuring protein H-NS
Daci_3934 histone family protein nucleoid-structuring protein H-NS
Daci_2158 histone family protein nucleoid-structuring protein H-NS
Daci_1968 histone family protein nucleoid-structuring protein H-NS
Daci_1913 histone family protein nucleoid-structuring protein H-NS
Daci_3414 histone family protein nucleoid-structuring protein H-NS
Daci_4128 histone family protein nucleoid-structuring protein H-NS
Daci_1710 histone family protein nucleoid-structuring protein H-NS
Daci_3476 histone family protein nucleoid-structuring protein H-NS
Daci_4465 histone family protein nucleoid-structuring protein H-NS
Daci_4714 histone family protein nucleoid-structuring protein H-NS
Daci_4071 histone family protein nucleoid-structuring protein H-NS
Daci_5287 DNA-directed DNA polymerase
Daci_3565 transcriptional repressor, LexA family
Daci_4263 conserved hypothetical protein
Daci_4262 conserved hypothetical protein
Daci_4261 DNA polymerase III, alpha subunit
Daci_0873 regulatory protein RecX
Daci_0554 UvrD/REP helicase
Daci_0021 helicase c2
Daci_3499 helicase c2
Daci_3045 DEAD/H associated domain protein
Daci_5141 DEAD/DEAH box helicase domain protein
Daci_1501 ribonucleoside-diphosphate reductase, alpha subunit
Daci_1115 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
Daci_1500 Ribonucleoside-diphosphate reductase
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K03554 rdgC; recombination associated protein RdgC
K15342 cas1; CRISP-associated protein Cas1
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K07455 recT; recombination protein RecT
K07455 recT; recombination protein RecT
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14160 imuA; protein ImuA
K14161 imuB; protein ImuB
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03565 recX; regulatory protein
K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:dac03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Delftia acidovorans