DNA Repair and Recombination Proteins - Dickeya dadantii 3937

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     KO
 Eukaryotic type
 
 Prokaryotic type
   SSBR (single strand breaks repair)
   DSBR (double strand breaks repair)
     HR (homologous recombination)
       RecBC pathway proteins
         Dda3937_02948 recB; exonuclease V (RecBCD complex), beta subunit
         Dda3937_02947 recC; exonuclease V (RecBCD complex), gamma chain
         Dda3937_02949 recD; exonuclease V (RecBCD complex), alpha chain
         Dda3937_03154 recA; DNA strand exchange and recombination protein with protease and nuclease activity
         Dda3937_01621 ruvA; component of RuvABC resolvasome, regulatory subunit
         Dda3937_01622 ruvB; ATP-dependent DNA helicase, component of RuvABC resolvasome
         Dda3937_01619 ruvC; component of RuvABC resolvasome, endonuclease
         Dda3937_03886 priA; Primosome factor n' (replication factor Y)
         Dda3937_02618 priB; primosomal protein N
         Dda3937_03295 priC; Primosomal replication protein N prime prime
         Dda3937_03731 sbcB; exonuclease I
         Dda3937_01937 sbcC; exonuclease, dsDNA, ATP-dependent
         Dda3937_01938 sbcD; exonuclease, dsDNA, ATP-dependent
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] 
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] 
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] 
K03553 recA; recombination protein RecA 
K03550 ruvA; holliday junction DNA helicase RuvA 
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] 
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] 
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] 
K02686 priB; primosomal replication protein N 
K04067 priC; primosomal replication protein N'' 
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] 
K03546 sbcC; DNA repair protein SbcC/Rad50 
K03547 sbcD; DNA repair protein SbcD/Mre11 
       RecFOR pathway proteins
         Dda3937_03154 recA; DNA strand exchange and recombination protein with protease and nuclease activity
         Dda3937_02677 radA; predicted repair protein
         Dda3937_01058 recF; gap repair protein
         Dda3937_01125 recG; ATP-dependent DNA helicase
         Dda3937_02294 recJ; ssDNA exonuclease, 5' --> 3'-specific
         Dda3937_03852 recO; gap repair protein
         Dda3937_03289 recR; gap repair protein
         Dda3937_02547 recN; recombination and repair protein
         Dda3937_01935 yaiD; DNA recombination-dependent growth factor C
         Dda3937_01621 ruvA; component of RuvABC resolvasome, regulatory subunit
         Dda3937_01622 ruvB; ATP-dependent DNA helicase, component of RuvABC resolvasome
         Dda3937_01619 ruvC; component of RuvABC resolvasome, endonuclease
K03553 recA; recombination protein RecA 
K04485 radA; DNA repair protein RadA/Sms 
K03629 recF; DNA replication and repair protein RecF 
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] 
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] 
K03584 recO; DNA repair protein RecO (recombination protein O) 
K06187 recR; recombination protein RecR 
K03631 recN; DNA repair protein RecN (Recombination protein N) 
K03554 rdgC; recombination associated protein RdgC 
K03550 ruvA; holliday junction DNA helicase RuvA 
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] 
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] 
       AddAB pathway proteins
       Other HR factor
       Archaeal homologous recombinant proteins
     NHEJ (non-homologous end-joining)
   TLS (translesion DNA synthesis) factors
   Other factors with a suspected DNA repair function

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Last updated: February 5, 2024