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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:dec03030]
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03410 Base excision repair [PATH:dec03410]
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03420 Nucleotide excision repair [PATH:dec03420]
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03430 Mismatch repair [PATH:dec03430]
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03440 Homologous recombination [PATH:dec03440]
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 DCF50_p900 Single-stranded-DNA-specific exonuclease RecJ
DCF50_p2966 Single-stranded DNA-binding protein
DCF50_p3 recF; DNA recombination and repair protein RecF
DCF50_p2547 DNA recombination and repair protein RecO
DCF50_p267 recR; Recombination protein RecR
DCF50_p377 recA; RecA protein
DCF50_p914 ruvA; Holliday junction DNA helicase RuvA
DCF50_p913 ruvB; Holliday junction DNA helicase RuvB
DCF50_p915 ruvC; Crossover junction endodeoxyribonuclease RuvC
DCF50_p2171 ATP-dependent DNA helicase RecG
DCF50_p988 DNA polymerase III alpha subunit, DnaE
DCF50_p2090 DNA polymerase III alpha subunit, PolC
DCF50_p2 dnaN; DNA polymerase III beta subunit
DCF50_p265 dnaX; DNA polymerase III subunits gamma and tau, DnaX
DCF50_p2583 DNA polymerase III delta subunit
DCF50_p272 DNA polymerase III delta prime subunit
DCF50_p2191 primosomal protein N''
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining [PATH:dec03450]
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:dec03000]
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03021 Transcription machinery [BR:dec03021]
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03019 Messenger RNA biogenesis [BR:dec03019]
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03041 Spliceosome [BR:dec03041]
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03011 Ribosome [BR:dec03011]
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03009 Ribosome biogenesis [BR:dec03009]
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03016 Transfer RNA biogenesis [BR:dec03016]
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03012 Translation factors [BR:dec03012]
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03110 Chaperones and folding catalysts [BR:dec03110]
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04131 Membrane trafficking [BR:dec04131]
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04121 Ubiquitin system
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03051 Proteasome [BR:dec03051]
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03032 DNA replication proteins [BR:dec03032]
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03036 Chromosome and associated proteins [BR:dec03036]
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03400 DNA repair and recombination proteins [BR:dec03400]
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DCF50_p2606 Methylated-DNA--protein-cysteine methyltransferase
DCF50_p773 Uracil-DNA glycosylase, family 1
DCF50_p737 A/G-specific adenine glycosylase
DCF50_p430 Endonuclease III
DCF50_p2806 DinG family ATP-dependent helicase
DCF50_p2474 hypothetical protein
DCF50_p2481 mutator mutT protein
DCF50_p2072 Deoxyuridine 5'-triphosphate nucleotidohydrolase
DCF50_p973 Formamidopyrimidine-DNA glycosylase
DCF50_p2119 Endonuclease IV
DCF50_p900 Single-stranded-DNA-specific exonuclease RecJ
DCF50_p1420 DNA ligase
DCF50_p2846 uvrA; Excinuclease ABC subunit A
DCF50_p2847 uvrB; Excinuclease ABC subunit B
DCF50_p445 Excinuclease ABC subunit C
DCF50_p48 ATP-dependent DNA helicase UvrD/PcrA
DCF50_p1421 ATP-dependent DNA helicase UvrD/PcrA
DCF50_p2484 Superfamily I DNA and RNA helicase
DCF50_p1906 rpoB; DNA-directed RNA polymerase beta subunit
DCF50_p1905 rpoC; DNA-directed RNA polymerase beta' subunit
DCF50_p1872 DNA-directed RNA polymerase alpha subunit
DCF50_p1449 DNA-directed RNA polymerase omega subunit
DCF50_p326 Transcription-repair coupling factor
DCF50_p659 DNA mismatch repair protein MutS
DCF50_p1955 Recombination inhibitory protein MutS2
DCF50_p662 DNA mismatch repair protein MutL
DCF50_p515 xseA; Exodeoxyribonuclease VII large subunit
DCF50_p516 xseB; Exonuclease VII small subunit
DCF50_p988 DNA polymerase III alpha subunit, DnaE
DCF50_p2090 DNA polymerase III alpha subunit, PolC
DCF50_p2 dnaN; DNA polymerase III beta subunit
DCF50_p2583 DNA polymerase III delta subunit
DCF50_p272 DNA polymerase III delta prime subunit
DCF50_p265 dnaX; DNA polymerase III subunits gamma and tau, DnaX
DCF50_p2966 Single-stranded DNA-binding protein
DCF50_p1356 Site-specific DNA methylase
DCF50_p377 recA; RecA protein
DCF50_p914 ruvA; Holliday junction DNA helicase RuvA
DCF50_p913 ruvB; Holliday junction DNA helicase RuvB
DCF50_p915 ruvC; Crossover junction endodeoxyribonuclease RuvC
DCF50_p2191 primosomal protein N''
DCF50_p716 sbcC; Exonuclease SbcC
DCF50_p717 sbcD; Exonuclease SbcD
DCF50_p739 DNA double-strand break repair protein Mre11
DCF50_p1931 DNA repair protein RadA
DCF50_p3 recF; DNA recombination and repair protein RecF
DCF50_p2171 ATP-dependent DNA helicase RecG
DCF50_p2547 DNA recombination and repair protein RecO
DCF50_p267 recR; Recombination protein RecR
DCF50_p526 DNA repair protein RecN
DCF50_p2228 ATP-dependent nuclease, subunit A
DCF50_p2229 ATP-dependent nuclease, subunit B
DCF50_p2463 putative helicase
DCF50_p2125 Ku domain protein
DCF50_p2126 ATP-dependent DNA ligase
DCF50_p2127 ATP-dependent DNA ligase clustered with Ku protein, LigD
DCF50_p6 gyrA; DNA gyrase subunit A
DCF50_p5 gyrB; DNA gyrase subunit B
DCF50_p2108 DNA topoisomerase I
DCF50_p330 DNA-binding protein HBsu
DCF50_p2243 ATP-dependent DNA helicase RecQ
DCF50_p1231 DNA polymerase IV
DCF50_p2353 DNA polymerase IV
DCF50_p671 SOS-response repressor and protease LexA
DCF50_p2321 SOS-response repressor and protease LexA
DCF50_p2453 DNA-damage-inducible protein D
DCF50_p378 recX; regulatory protein RecX
DCF50_p887 DinG family ATP-dependent helicase YoaA
DCF50_p2735 Ribonucleotide reductase of class II (coenzyme B12-dependent)
DCF50_p2080 hypothetical protein
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K19789 radD; DNA repair protein RadD
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14623 dinD; DNA-damage-inducible protein D
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:dec03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Dehalobacter sp. CF