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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:dmr03030]
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03410 Base excision repair [PATH:dmr03410]
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03420 Nucleotide excision repair [PATH:dmr03420]
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03430 Mismatch repair [PATH:dmr03430]
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03440 Homologous recombination [PATH:dmr03440]
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 Deima_2062 single-stranded-DNA-specific exonuclease RecJ
Deima_0524 single-strand binding protein
Deima_2171 DNA replication and repair protein recF
Deima_2467 DNA repair protein recO
Deima_0835 Recombination protein recR
Deima_2847 Protein recA
Deima_1440 DNA polymerase I
Deima_1434 Holliday junction ATP-dependent DNA helicase ruvA
Deima_0962 Holliday junction ATP-dependent DNA helicase ruvB
Deima_0066 Crossover junction endodeoxyribonuclease ruvC
Deima_1726 putative transcriptional regulator
Deima_2358 ATP-dependent DNA helicase RecG
Deima_1604 helicase, RecD/TraA family
Deima_0473 DNA polymerase III, alpha subunit
Deima_0002 DNA polymerase III, beta subunit
Deima_0798 DNA polymerase III, subunits gamma and tau
Deima_1294 DNA polymerase III, delta subunit
Deima_0035 DNA polymerase III, epsilon subunit
Deima_0043 Exonuclease RNase T and DNA polymerase III
Deima_0665 primosomal protein N'
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:dmr03000]
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03021 Transcription machinery [BR:dmr03021]
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03019 Messenger RNA biogenesis [BR:dmr03019]
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03041 Spliceosome
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03011 Ribosome [BR:dmr03011]
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03009 Ribosome biogenesis [BR:dmr03009]
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03016 Transfer RNA biogenesis [BR:dmr03016]
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03012 Translation factors [BR:dmr03012]
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03110 Chaperones and folding catalysts [BR:dmr03110]
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04131 Membrane trafficking [BR:dmr04131]
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04121 Ubiquitin system [BR:dmr04121]
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03051 Proteasome [BR:dmr03051]
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03032 DNA replication proteins [BR:dmr03032]
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03036 Chromosome and associated proteins [BR:dmr03036]
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03400 DNA repair and recombination proteins [BR:dmr03400]
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Deima_0604 Uracil-DNA glycosylase
Deima_0477 3-methyladenine DNA glycosylase
Deima_1135 3-methyladenine DNA glycosylase
Deima_0475 A/G-specific adenine glycosylase
Deima_0534 HhH-GPD family protein
Deima_2441 endonuclease III
Deima_2148 iron-sulfur cluster loop
Deima_0889 NUDIX hydrolase
Deima_1458 NUDIX hydrolase
Deima_2812 NUDIX hydrolase
Deima_2106 NUDIX hydrolase
Deima_1132 NUDIX hydrolase
Deima_0569 NUDIX hydrolase
Deima_0684 Ada DNA repair protein and transcriptional regulator, AraC family
Deima_2676 Uracil-DNA glycosylase superfamily
Deima_2236 phage SPO1 DNA polymerase-related protein
Deima_3004 HhH-GPD family protein
Deima_2335 Formamidopyrimidine-DNA glycosylase
Deima_2111 exodeoxyribonuclease III Xth
Deima_2628 hypothetical protein
Deima_2062 single-stranded-DNA-specific exonuclease RecJ
Deima_1950 DNA ligase
Deima_1440 DNA polymerase I
Deima_0190 excinuclease ABC, A subunit
Deima_1751 UvrABC system protein A
Deima_0032 UvrABC system protein B
Deima_1868 UvrABC system protein C
Deima_0393 putative UvrD/rep helicase family protein
Deima_1926 UvrD/REP helicase
Deima_0821 DNA-directed RNA polymerase subunit beta
Deima_0820 DNA-directed RNA polymerase subunit beta'
Deima_2913 DNA-directed RNA polymerase subunit alpha
Deima_3107 DNA-directed RNA polymerase subunit omega
Deima_2361 transcription factor CarD
Deima_2507 DNA mismatch repair protein MutS
Deima_1663 MutS2 protein
Deima_2506 DNA mismatch repair protein mutL
Deima_3113 Exodeoxyribonuclease VII
Deima_3117 Exonuclease VII small subunit
Deima_0473 DNA polymerase III, alpha subunit
Deima_0002 DNA polymerase III, beta subunit
Deima_1294 DNA polymerase III, delta subunit
Deima_0035 DNA polymerase III, epsilon subunit
Deima_0043 Exonuclease RNase T and DNA polymerase III
Deima_0798 DNA polymerase III, subunits gamma and tau
Deima_0524 single-strand binding protein
Deima_3171 D12 class N6 adenine-specific DNA methyltransferase
Deima_0842 DNA mismatch endonuclease Vsr
Deima_1604 helicase, RecD/TraA family
Deima_2847 Protein recA
Deima_1434 Holliday junction ATP-dependent DNA helicase ruvA
Deima_0962 Holliday junction ATP-dependent DNA helicase ruvB
Deima_0066 Crossover junction endodeoxyribonuclease ruvC
Deima_0665 primosomal protein N'
Deima_1612 SMC domain protein
Deima_1611 nuclease SbcCD, D subunit
Deima_1521 DNA repair protein RadA
Deima_2171 DNA replication and repair protein recF
Deima_1726 putative transcriptional regulator
Deima_2358 ATP-dependent DNA helicase RecG
Deima_2467 DNA repair protein recO
Deima_0835 Recombination protein recR
Deima_1758 DNA repair protein RecN
Deima_2399 DNA gyrase, A subunit
Deima_1465 DNA topoisomerase (ATP-hydrolyzing)
Deima_0405 DNA topoisomerase I
Deima_1179 DNA topoisomerase
Deima_2707 DNA topoisomerase I
Deima_1042 histone family protein DNA-binding protein
Deima_1832 histone family protein DNA-binding protein
Deima_2158 ATP-dependent DNA helicase, RecQ family
Deima_2220 ATP-dependent DNA helicase RecQ
Deima_2288 DNA polymerase IV
Deima_2840 Peptidase S24/S26A/S26B, conserved region
Deima_2008 Regulatory protein recX
Deima_1193 PHP domain protein
Deima_0052 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
Deima_2601 phosphoesterase RecJ domain protein
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K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K03565 recX; regulatory protein
K02347 polX; DNA polymerase (family X)
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:dmr03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Deinococcus maricopensis