Transcription Machinery - Danio rerio (zebrafish)

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 Eukaryotic type
   RNA polymerase II system
     RNA polymerase II
     Basal transcription factors
     Mediator complex
     Coactivators
     Other transcription-related factors
       Transcription elongation factors
       Transcription termination factor
         555382 ttf2; transcription termination factor 2
         492341 pcf11; pre-mRNA cleavage complex 2 protein Pcf11
         432372 cpsf1; cleavage and polyadenylation specificity factor subunit 1
         324554 cpsf3; cleavage and polyadenylation specificity factor subunit 3
         30203 cpsf4; cleavage and polyadenylation specificity factor subunit 4
         327301 ppp1cab; protein phosphatase 1, catalytic subunit, alpha isozyme b
         407980 ppp1caa; protein phosphatase 1, catalytic subunit, alpha isozyme a
         334597 ppp1cbl; protein phosphatase 1, catalytic subunit, beta isoform, like
         100003223 ppp1cb; serine/threonine-protein phosphatase PP1-beta catalytic subunit
         571753 ppp1cc; serine/threonine-protein phosphatase PP1-gamma catalytic subunit
         570858 sympk; symplekin isoform X2
         393701 ssu72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72
         321940 xrn2; 5'-3' exoribonuclease 2
         494170 dxo; decapping and exoribonuclease protein
         321636 rprd1b; regulation of nuclear pre-mRNA domain-containing protein 1B
         406564 sfpq; splicing factor, proline- and glutamine-rich
         326092 scaf8; protein SCAF8 isoform X1
         567501 scaf4a; splicing factor, arginine/serine-rich 15
         562474 setx; probable helicase senataxin isoform X1
         393721 pin1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
K15173 TTF2; transcription termination factor 2 [EC:5.6.2.-] 
K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
K06100 SYMPK; symplekin 
K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
K14845 RAI1; RAT1-interacting protein 
K15559 RTT103; regulator of Ty1 transposition protein 103 
K13219 SFPQ; splicing factor, proline- and glutamine-rich 
K13191 RBM16; RNA-binding protein 16 
K13167 SCAF4; SR-related and CTD-associated factor 4 
K10706 SETX; senataxin [EC:5.6.2.-] 
K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
       PAF1 complex
       NELF complex
       Super elongation complex (SEC)
       Little elongation complex (LEC)
       Brd4/P-TEFb complex
       BUR kinase complex
       CTDK-I complex
       7SK RNP complex
       DBIRD complex
       Others
   RNA polymerase III system
   RNA polymerase I system
 
 Prokaryotic type

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Last updated: April 9, 2024