DNA Repair and Recombination Proteins - Escherichia fergusonii

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     KO
 Eukaryotic type
 
 Prokaryotic type
   SSBR (single strand breaks repair)
     Direct repair
     BER (base exicision repair)
     NER (nucleotide excision repair)
     MMR (mismatch excision repair)
       Mismatch and loop recognition factors
       Molecular matchmaker
       Strand discrimination factor
       DNA exonucleases
       DNA polymerase III holoenzyme
         EFER_0207 dnaE; DNA polymerase III alpha subunit
         EFER_3996 dnaN; DNA polymerase III, beta subunit
         EFER_4340 holC; DNA polymerase III, chi subunit
         EFER_2466 holA; DNA polymerase III, delta subunit
         EFER_1828 holB; DNA polymerase III, delta' subunit
         EFER_0244 dnaQ; DNA polymerase III epsilon subunit
         EFER_2547 dnaX; DNA polymerase III/DNA elongation factor III, tau and gamma subunits
         EFER_4413 holD; DNA polymerase III, psi subunit
         EFER_1231 DNA polymerase III, theta subunit (modular protein)
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] 
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] 
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] 
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] 
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] 
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] 
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] 
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] 
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] 
       DNA ligase
       Other MMR factors
   DSBR (double strand breaks repair)
   TLS (translesion DNA synthesis) factors
   Other factors with a suspected DNA repair function

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Last updated: March 29, 2024