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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:efl03030]
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03410 Base excision repair [PATH:efl03410]
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 EF62_1605 nth; endonuclease III
EF62_1321 ung; uracil-DNA glycosylase
EF62_2862 mutY; A/G-specific adenine glycosylase
EF62_2339 DNA-3-methyladenine glycosylase family protein
EF62_1253 mutM; formamidopyrimidine-DNA glycosylase
EF62_0666 tag-1; methyladenine glycosylase family protein
EF62_0127 methyladenine glycosylase family protein
EF62_1027 uracil DNA glycosylase superfamily protein
EF62_2889 xth; exodeoxyribonuclease III
EF62_2110 apurinic endonuclease (APN1) family protein
EF62_1252 polA; DNA polymerase I
EF62_2066 recJ; single-stranded-DNA-specific exonuclease RecJ
EF62_1108 ligA; DNA ligase, NAD-dependent
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K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03420 Nucleotide excision repair [PATH:efl03420]
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03430 Mismatch repair [PATH:efl03430]
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03440 Homologous recombination [PATH:efl03440]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:efl03000]
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03021 Transcription machinery [BR:efl03021]
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03019 Messenger RNA biogenesis [BR:efl03019]
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03041 Spliceosome
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03011 Ribosome [BR:efl03011]
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03009 Ribosome biogenesis [BR:efl03009]
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03016 Transfer RNA biogenesis [BR:efl03016]
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03012 Translation factors [BR:efl03012]
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03110 Chaperones and folding catalysts [BR:efl03110]
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04131 Membrane trafficking [BR:efl04131]
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04121 Ubiquitin system
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03051 Proteasome
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03032 DNA replication proteins [BR:efl03032]
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03036 Chromosome and associated proteins [BR:efl03036]
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03400 DNA repair and recombination proteins [BR:efl03400]
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EF62_1975 deoxyribodipyrimidine photo-lyase
EF62_1321 ung; uracil-DNA glycosylase
EF62_2339 DNA-3-methyladenine glycosylase family protein
EF62_2862 mutY; A/G-specific adenine glycosylase
EF62_1605 nth; endonuclease III
EF62_1612 DEAD_2 family protein
EF62_1591 NUDIX domain protein
EF62_1161 NUDIX domain protein
EF62_1972 NUDIX domain protein
EF62_2858 NUDIX domain protein
EF62_0429 dUTPase family protein
EF62_0664 methylphosphotriester-DNA alkyltransferase
EF62_0665 ogt; methylated-DNA--protein-cysteine methyltransferase
EF62_1027 uracil DNA glycosylase superfamily protein
EF62_0666 tag-1; methyladenine glycosylase family protein
EF62_0127 methyladenine glycosylase family protein
EF62_1253 mutM; formamidopyrimidine-DNA glycosylase
EF62_2889 xth; exodeoxyribonuclease III
EF62_2110 apurinic endonuclease (APN1) family protein
EF62_2066 recJ; single-stranded-DNA-specific exonuclease RecJ
EF62_1108 ligA; DNA ligase, NAD-dependent
EF62_1252 polA; DNA polymerase I
EF62_1147 uvrA; excinuclease ABC, Alpha subunit
EF62_1146 uvrB; excinuclease ABC, Beta subunit
EF62_2125 excision endonuclease subunit UvrC
EF62_1857 uvrC; excinuclease ABC, C subunit
EF62_0818 uvrD/REP helicase family protein
EF62_1306 conserved hypothetical protein
EF62_1107 pcrA; ATP-dependent DNA helicase PcrA
EF62_0295 rpoB; DNA-directed RNA polymerase, beta subunit
EF62_0294 rpoC; DNA-directed RNA polymerase, beta subunit
EF62_0603 rpoA; DNA-directed RNA polymerase, alpha subunit
EF62_1596 DNA-directed RNA polymerase subunit delta (RNAP delta factor)
EF62_0196 rpoZ; DNA-directed RNA polymerase, omega subunit
EF62_0625 mfd; transcription-repair coupling factor
EF62_0238 mutS; DNA mismatch repair protein MutS
EF62_1855 mutS2 protein
EF62_0060 mutS domain V family protein
EF62_0237 mutL; DNA mismatch repair protein mutL
EF62_1414 xseA; exodeoxyribonuclease VII, large subunit
EF62_1415 xseB; exodeoxyribonuclease VII, small subunit
EF62_1482 dnaE; DNA polymerase III subunit alpha
EF62_2567 polC; DNA polymerase III, alpha subunit, Gram-positive type
EF62_0394 dnaN; DNA polymerase III, beta subunit
EF62_2665 holA; DNA polymerase III, delta subunit
EF62_2914 holB; DNA polymerase III subunit delta'
EF62_2890 DNA polymerase III, epsilon subunit, 3'-5' exonuclease family protein
EF62_2933 dnaX; DNA polymerase III, subunits gamma and tau
EF62_0400 ssb; single-stranded DNA-binding protein
EF62_pB0044 pcfS; single-stranded DNA-binding protein (SSB) (Helix-destabilizingprotein), PcfS
EF62_pC0034 ssb-1; single-strand binding family protein
EF62_pC0045 ssb; single-stranded DNA-binding protein (SSB) (Helix-destabilizingprotein)
EF62_2822 exodeoxyribonuclease V alpha chain
EF62_0242 recA; recombination protein A
EF62_0451 ruvA; holliday junction DNA helicase RuvA
EF62_0452 ruvB; holliday junction DNA helicase RuvB
EF62_0195 priA; primosomal protein N
EF62_2848 exonuclease SbcC
EF62_2849 sbcD; nuclease SbcCD, D subunit
EF62_0430 radA; DNA repair protein RadA
EF62_0396 recF; DNA replication and repair protein recF
EF62_0179 recG; ATP-dependent DNA helicase RecG
EF62_2628 recO; DNA repair protein RecO
EF62_2918 recR; recombination protein RecR
EF62_1419 recN; DNA repair protein RecN
EF62_1599 recU; recombination protein U
EF62_1564 addA; recombination helicase AddA
EF62_1563 exonuclease RexB
EF62_0398 gyrA; DNA gyrase, A subunit
EF62_0397 gyrB; DNA gyrase, B subunit
EF62_1214 conserved hypothetical protein
EF62_2028 topA; DNA topoisomerase I
EF62_1930 DNA-binding protein HU 1
EF62_2391 recombinase, phage RecT family protein
EF62_1925 ATP-dependent DNA helicase recQ
EF62_2678 recQ; ATP-dependent DNA helicase RecQ
EF62_2908 DNA polymerase IV
EF62_pB0058 uvrA; ImpB/mucB/samB family protein
EF62_1532 impB/mucB/samB family protein
EF62_1959 lexA; LexA repressor
EF62_2863 recX family protein
EF62_2562 DnaQ family exonuclease/DinG family helicase
EF62_0793 nrdE; ribonucleoside-diphosphate reductase, alpha subunit
EF62_0792 nrdF; ribonucleoside-diphosphate reductase, beta subunit
EF62_1825 DHHA1 domain protein
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K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03700 recU; recombination protein U
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K07455 recT; recombination protein RecT
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K03502 umuC; DNA polymerase V
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:efl03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Enterococcus faecalis 62