DNA Repair and Recombination Proteins - Escherichia coli O83:H1 NRG 857C (AIEC)

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     KO
 Eukaryotic type
 
 Prokaryotic type
   SSBR (single strand breaks repair)
   DSBR (double strand breaks repair)
     HR (homologous recombination)
       RecBC pathway proteins
         NRG857_13930 recB; exonuclease V subunit beta
         NRG857_13940 recC; exonuclease V subunit gamma
         NRG857_13925 recD; exonuclease V subunit alpha
         NRG857_13205 recA; recombinase A
         NRG857_09330 ruvA; Holliday junction DNA helicase RuvA
         NRG857_09325 ruvB; Holliday junction DNA helicase RuvB
         NRG857_09340 ruvC; Holliday junction resolvase
         NRG857_04670 crossover junction endodeoxyribonuclease
         NRG857_05615 endodeoxyribonuclease RUS
         NRG857_19645 primosome assembly protein PriA
         NRG857_21355 primosomal replication protein N
         NRG857_02210 primosomal replication protein N''
         NRG857_22055 primosomal protein DnaI
         NRG857_10265 sbcB; exonuclease I
         NRG857_01860 exonuclease subunit SbcC
         NRG857_01865 exonuclease subunit SbcD
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] 
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] 
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] 
K03553 recA; recombination protein RecA 
K03550 ruvA; holliday junction DNA helicase RuvA 
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] 
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] 
K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] 
K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] 
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] 
K02686 priB; primosomal replication protein N 
K04067 priC; primosomal replication protein N'' 
K02317 dnaT; DNA replication protein DnaT 
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] 
K03546 sbcC; DNA repair protein SbcC/Rad50 
K03547 sbcD; DNA repair protein SbcD/Mre11 
       RecFOR pathway proteins
         NRG857_13205 recA; recombinase A
         NRG857_22195 DNA repair protein RadA
         NRG857_18430 recF; recombination protein F
         NRG857_18155 ATP-dependent DNA helicase RecG
         NRG857_14195 ssDNA exonuclease RecJ
         NRG857_12735 recO; DNA repair protein RecO
         NRG857_02235 recR; recombination protein RecR
         NRG857_12990 recombination and repair protein
         NRG857_01845 rdgC; recombination associated protein
         NRG857_09330 ruvA; Holliday junction DNA helicase RuvA
         NRG857_09325 ruvB; Holliday junction DNA helicase RuvB
         NRG857_09340 ruvC; Holliday junction resolvase
K03553 recA; recombination protein RecA 
K04485 radA; DNA repair protein RadA/Sms 
K03629 recF; DNA replication and repair protein RecF 
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] 
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] 
K03584 recO; DNA repair protein RecO (recombination protein O) 
K06187 recR; recombination protein RecR 
K03631 recN; DNA repair protein RecN (Recombination protein N) 
K03554 rdgC; recombination associated protein RdgC 
K03550 ruvA; holliday junction DNA helicase RuvA 
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] 
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] 
       AddAB pathway proteins
       Other HR factor
       Archaeal homologous recombinant proteins
     NHEJ (non-homologous end-joining)
   TLS (translesion DNA synthesis) factors
   Other factors with a suspected DNA repair function

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Last updated: March 29, 2024