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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:erj03030]
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03410 Base excision repair [PATH:erj03410]
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03420 Nucleotide excision repair [PATH:erj03420]
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03430 Mismatch repair [PATH:erj03430]
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03440 Homologous recombination [PATH:erj03440]
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 EJP617_18080 recJ; ssDNA exonuclease RecJ
EJP617_06840 single strand DNA-binding protein
EJP617_07810 ssb; Single-stranded DNA-binding protein
EJP617_11410 recF; DNA replication and repair protein recF
EJP617_00820 recO; DNA repair protein RecO
EJP617_21450 recR; Recombination protein
EJP617_19390 recA; Recombinase A
EJP617_11980 polA; DNA polymerase I
EJP617_31350 ruvA; Holliday junction DNA helicase RuvA
EJP617_31340 ruvB; Holliday junction DNA helicase RuvB
EJP617_31360 ruvC; Holliday junction resolvase
EJP617_12130 recG; ATP-dependent DNA helicase RecG
EJP617_18710 recB; exonuclease V subunit beta
EJP617_18690 recC; exonuclease V subunit gamma
EJP617_18720 recD; exonuclease V subunit alpha
EJP617_02040 dnaE; DNA polymerase III subunit alpha
EJP617_11420 dnaN; DNA polymerase III subunit beta
EJP617_21430 dnaX; DNA polymerase III subunit tau
EJP617_22450 holA; DNA polymerase III subunit delta
EJP617_25810 holB; DNA polymerase III, delta' subunit
EJP617_19740 dnaQ; DNA polymerase III subunit epsilon
EJP617_31190 holE; DNA polymerase III theta subunit
EJP617_15460 holC; DNA polymerase III subunit chi
EJP617_04890 holD; DNA polymerase III, psi subunit
EJP617_13040 priA; Primosomal protein N'
EJP617_05880 priB; primosomal replication protein N
EJP617_21400 priC; Primosomal replication protein N''
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04067 priC; primosomal replication protein N''
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:erj03000]
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03021 Transcription machinery [BR:erj03021]
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03019 Messenger RNA biogenesis [BR:erj03019]
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03041 Spliceosome
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03011 Ribosome [BR:erj03011]
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03009 Ribosome biogenesis [BR:erj03009]
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03016 Transfer RNA biogenesis [BR:erj03016]
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03012 Translation factors [BR:erj03012]
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03110 Chaperones and folding catalysts [BR:erj03110]
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04131 Membrane trafficking [BR:erj04131]
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04121 Ubiquitin system [BR:erj04121]
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03051 Proteasome [BR:erj03051]
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03032 DNA replication proteins [BR:erj03032]
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03036 Chromosome and associated proteins [BR:erj03036]
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03400 DNA repair and recombination proteins [BR:erj03400]
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EJP617_23040 Methylated-DNA-(Protein)-cysteine S-methyltransferase
EJP617_22770 phrB; deoxyribodipyrimidine photolyase (photoreactivation)
EJP617_00990 ung; Uracil-DNA-glycosylase
EJP617_17390 mutY; adenine DNA glycosylase
EJP617_28520 nth; Endonuclease III
EJP617_03260 mutT; Mutator protein MutT (7,8-dihydro-8-oxoguanine-triphosphatase)
EJP617_21500 NUDIX hydrolase, YcfB family protein
EJP617_12360 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
EJP617_33990 alkB; DNA repair system specific for alkylated DNA
EJP617_15680 mug; G/U mismatch-specific DNA glycosylase
EJP617_04400 DNA-3-methyladenine glycosylase I
EJP617_11240 tag; 3-methyl-adenine DNA glycosylase I
EJP617_12410 mutM; formamidopyrimidine-DNA glycosylase
EJP617_22850 nei; endonuclease VIII and formamidopyrimidine-DNA glycosylase
EJP617_30560 xthA; hypothetical protein
EJP617_33580 nfo; endonuclease IV
EJP617_13600 nfi; endonuclease V
EJP617_18080 recJ; ssDNA exonuclease RecJ
EJP617_35380 ligA; NAD-dependent DNA ligase LigA
EJP617_12190 ligB; NAD-dependent DNA ligase LigB
EJP617_11980 polA; DNA polymerase I
EJP617_07820 uvrA; excinuclease ABC subunit A
EJP617_23350 uvrB; excinuclease ABC subunit B
EJP617_25150 uvrC; excinuclease ABC subunit C
EJP617_27770 cho; nucleotide excision repair endonuclease
EJP617_14050 uvrD; DNA helicase II
EJP617_13430 rpoB; DNA-directed RNA polymerase beta-subunit
EJP617_13440 rpoC; DNA-directed RNA polymerase subunit beta'
EJP617_08420 DNA-directed RNA polymerase subunit alpha
EJP617_12160 rpoZ; DNA-directed RNA polymerase omega chain
EJP617_25940 mfd; transcription-repair coupling factor
EJP617_19230 mutS; DNA mismatch repair protein MutS
EJP617_06020 mutL; DNA mismatch repair protein
EJP617_18560 mutH; DNA mismatch repair protein
EJP617_32760 sbcB; exonuclease I
EJP617_00340 xseA; exodeoxyribonuclease VII large subunit
EJP617_20930 xseB; exodeoxyribonuclease VII small subunit
EJP617_31200 exoX; exodeoxyribonuclease X
EJP617_02040 dnaE; DNA polymerase III subunit alpha
EJP617_11420 dnaN; DNA polymerase III subunit beta
EJP617_15460 holC; DNA polymerase III subunit chi
EJP617_22450 holA; DNA polymerase III subunit delta
EJP617_25810 holB; DNA polymerase III, delta' subunit
EJP617_19740 dnaQ; DNA polymerase III subunit epsilon
EJP617_21430 dnaX; DNA polymerase III subunit tau
EJP617_04890 holD; DNA polymerase III, psi subunit
EJP617_31190 holE; DNA polymerase III theta subunit
EJP617_06840 single strand DNA-binding protein
EJP617_07810 ssb; Single-stranded DNA-binding protein
EJP617_09080 dam; DNA adenine methylase
EJP617_32140 vsr; DNA mismatch endonuclease, patch repair protein
EJP617_18710 recB; exonuclease V subunit beta
EJP617_18690 recC; exonuclease V subunit gamma
EJP617_18720 recD; exonuclease V subunit alpha
EJP617_19390 recA; Recombinase A
EJP617_31350 ruvA; Holliday junction DNA helicase RuvA
EJP617_31340 ruvB; Holliday junction DNA helicase RuvB
EJP617_31360 ruvC; Holliday junction resolvase
EJP617_13040 priA; Primosomal protein N'
EJP617_05880 priB; primosomal replication protein N
EJP617_21400 priC; Primosomal replication protein N''
EJP617_20680 sbcC; ATP-dependent dsDNA exonuclease
EJP617_20690 sbcD; exonuclease SbcD
EJP617_04280 radA; DNA repair protein RadA
EJP617_11410 recF; DNA replication and repair protein recF
EJP617_12130 recG; ATP-dependent DNA helicase RecG
EJP617_00820 recO; DNA repair protein RecO
EJP617_21450 recR; Recombination protein
EJP617_01020 recN; recombination and repair protein
EJP617_20580 rdgC; recombination associated protein
EJP617_02840 cas1; CRISPR-associated protein Cas1
EJP617_33740 yejH; Putative ATP-dependent helicase
EJP617_15520 yjgR; conserved uncharacterized protein YjgR
EJP617_34080 gyrA; DNA gyrase subunit A
EJP617_11400 gyrB; DNA gyrase subunit B
EJP617_30120 topA; DNA topoisomerase I
EJP617_13620 hupA; DNA-binding protein HU-alpha
EJP617_21160 hopD; HopD, DNA-binding protein HU-beta (Synonym HupB)
EJP617_14410 fis; DNA-binding protein Fis
EJP617_27970 ihfA; integration host factor subunit alpha
EJP617_24490 ihfB; integration host factor subunit beta
EJP617_14090 recQ; ATP-dependent DNA helicase RecQ
EJP617_A160 hns; global DNA-binding transcriptional dual regulator H-NS
EJP617_30470 hns; global DNA-binding transcriptional dual regulator H-NS
EJP617_20120 dinP; DNA polymerase IV
EJP617_31750 umuC; DNA-directed DNA polymerase
EJP617_31740 umuD; Protein UmuD
EJP617_08110 lexA; LexA repressor
EJP617_03760 polB; DNA polymerase II
EJP617_25440 dinI; Putative DNA damage-inducible protein I, inhibits UmuD processing
EJP617_19400 recX; Regulatory protein recX
EJP617_13770 rep; ATP-dependent DNA helicase Rep
EJP617_24920 helD; DNA helicase IV
EJP617_23680 dinG; ATP-dependent DNA helicase DinG
EJP617_30900 yoaA; Probable ATP-dependent helicase YoaA
EJP617_01710 nrdE; Ribonucleoside-diphosphate reductase subunit alpha
EJP617_34110 nrdA; ribonucleotide-diphosphate reductase subunit alpha
EJP617_34120 nrdB; ribonucleotide-diphosphate reductase subunit beta
EJP617_01720 nrdF; Ribonucleoside-diphosphate reductase 2, beta subunit
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K05984 cho; excinuclease Cho [EC:3.1.25.-]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03573 mutH; DNA mismatch repair protein MutH
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04067 priC; primosomal replication protein N''
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K15342 cas1; CRISP-associated protein Cas1
K19789 radD; DNA repair protein RadD
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K05787 hupA; DNA-binding protein HU-alpha
K03530 hupB; DNA-binding protein HU-beta
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K02336 polB; DNA polymerase II [EC:2.7.7.7]
K12149 dinI; DNA-damage-inducible protein I
K03565 recX; regulatory protein
K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
K03658 helD; DNA helicase IV [EC:5.6.2.4]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:erj03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Erwinia sp. Ejp617