09100 Metabolism
09120 Genetic Information Processing
09121 Transcription
09122 Translation
09123 Folding, sorting and degradation
09124 Replication and repair
03030 DNA replication [PATH:esa03030]
03410 Base excision repair [PATH:esa03410]
03420 Nucleotide excision repair [PATH:esa03420]
03430 Mismatch repair [PATH:esa03430]
03440 Homologous recombination [PATH:esa03440]
ESA_00439 hypothetical protein ESA_00108 hypothetical protein ESA_03974 hypothetical protein ESA_00694 hypothetical protein ESA_02794 hypothetical protein ESA_00567 hypothetical protein ESA_04040 hypothetical protein ESA_01380 hypothetical protein ESA_01381 hypothetical protein ESA_01379 hypothetical protein ESA_04074 hypothetical protein ESA_00489 hypothetical protein ESA_00487 hypothetical protein ESA_00490 hypothetical protein ESA_03157 hypothetical protein ESA_03975 hypothetical protein ESA_02688 hypothetical protein ESA_02245 hypothetical protein ESA_03124 hypothetical protein ESA_01398 hypothetical protein ESA_03446 hypothetical protein ESA_03465 hypothetical protein ESA_03380 hypothetical protein ESA_03825 hypothetical protein ESA_00201 hypothetical protein ESA_02803 hypothetical protein ESA_03396 hypothetical protein
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] K03111 ssb; single-strand DNA-binding protein K03629 recF; DNA replication and repair protein RecF K03584 recO; DNA repair protein RecO (recombination protein O) K06187 recR; recombination protein RecR K03553 recA; recombination protein RecA K02335 polA; DNA polymerase I [EC:2.7.7.7] K03550 ruvA; holliday junction DNA helicase RuvA K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] K02686 priB; primosomal replication protein N K04067 priC; primosomal replication protein N'' K02317 dnaT; DNA replication protein DnaT
03450 Non-homologous end-joining
03460 Fanconi anemia pathway
09126 Chromosome
09125 Information processing in viruses
09130 Environmental Information Processing
09140 Cellular Processes
09150 Organismal Systems
09160 Human Diseases
09180 Brite Hierarchies
09181 Protein families: metabolism
09182 Protein families: genetic information processing
03000 Transcription factors [BR:esa03000]
03021 Transcription machinery [BR:esa03021]
03019 Messenger RNA biogenesis [BR:esa03019]
03041 Spliceosome
03011 Ribosome [BR:esa03011]
03009 Ribosome biogenesis [BR:esa03009]
03016 Transfer RNA biogenesis [BR:esa03016]
03012 Translation factors [BR:esa03012]
03110 Chaperones and folding catalysts [BR:esa03110]
04131 Membrane trafficking [BR:esa04131]
04121 Ubiquitin system [BR:esa04121]
03051 Proteasome [BR:esa03051]
03032 DNA replication proteins [BR:esa03032]
03036 Chromosome and associated proteins [BR:esa03036]
03400 DNA repair and recombination proteins [BR:esa03400]
ESA_01953 hypothetical protein ESA_02638 hypothetical protein ESA_00680 hypothetical protein ESA_00330 hypothetical protein ESA_01992 hypothetical protein ESA_03239 hypothetical protein ESA_04382 hypothetical protein ESA_04092 hypothetical protein ESA_00976 hypothetical protein ESA_00977 hypothetical protein ESA_00353 hypothetical protein ESA_01149 hypothetical protein ESA_04184 hypothetical protein ESA_04096 hypothetical protein ESA_02628 hypothetical protein ESA_02158 hypothetical protein ESA_01078 hypothetical protein ESA_03675 hypothetical protein ESA_00439 hypothetical protein ESA_00834 hypothetical protein ESA_04079 hypothetical protein ESA_04040 hypothetical protein ESA_00107 hypothetical protein ESA_02566 hypothetical protein ESA_01310 hypothetical protein ESA_02150 hypothetical protein ESA_03745 hypothetical protein ESA_03690 hypothetical protein ESA_03689 hypothetical protein ESA_00031 hypothetical protein ESA_04077 hypothetical protein ESA_02230 hypothetical protein ESA_00558 hypothetical protein ESA_00180 hypothetical protein ESA_00478 hypothetical protein ESA_01206 hypothetical protein ESA_00753 hypothetical protein ESA_02880 hypothetical protein ESA_01397 hypothetical protein ESA_03157 hypothetical protein ESA_03975 hypothetical protein ESA_03446 hypothetical protein ESA_03465 hypothetical protein ESA_02688 hypothetical protein ESA_02245 hypothetical protein ESA_03124 hypothetical protein ESA_03380 hypothetical protein ESA_01398 hypothetical protein ESA_00108 hypothetical protein ESA_04355 hypothetical protein ESA_01238 hypothetical protein ESA_00489 hypothetical protein ESA_00487 hypothetical protein ESA_00490 hypothetical protein ESA_00567 hypothetical protein ESA_01380 hypothetical protein ESA_01381 hypothetical protein ESA_01379 hypothetical protein ESA_02753 hypothetical protein ESA_01621 hypothetical protein ESA_01012 hypothetical protein ESA_03825 hypothetical protein ESA_00201 hypothetical protein ESA_02803 hypothetical protein ESA_03396 hypothetical protein ESA_02907 hypothetical protein ESA_02906 hypothetical protein ESA_03363 hypothetical protein ESA_03974 hypothetical protein ESA_04074 hypothetical protein ESA_00694 hypothetical protein ESA_02794 hypothetical protein ESA_00640 hypothetical protein ESA_02909 hypothetical protein ESA_00998 hypothetical protein ESA_02832 hypothetical protein ESA_01052 hypothetical protein ESA_00969 hypothetical protein ESA_03973 hypothetical protein ESA_01571 hypothetical protein ESA_03673 hypothetical protein ESA_02858 hypothetical protein ESA_03651 hypothetical protein ESA_02114 hypothetical protein ESA_02432 hypothetical protein ESA_03738 hypothetical protein ESA_01537 hypothetical protein ESA_03117 hypothetical protein ESA_01263 hypothetical protein ESA_01727 hypothetical protein ESA_01726 hypothetical protein ESA_01262 hypothetical protein ESA_00089 hypothetical protein ESA_01011 hypothetical protein ESA_03280 hypothetical protein ESA_02287 hypothetical protein ESA_00568 hypothetical protein ESA_03779 hypothetical protein ESA_02386 hypothetical protein ESA_02543 hypothetical protein ESA_01452 hypothetical protein ESA_00591 hypothetical protein ESA_00967 hypothetical protein ESA_00590 hypothetical protein ESA_00966 hypothetical protein
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K01520 dut; dUTP diphosphatase [EC:3.6.1.23] K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] K02335 polA; DNA polymerase I [EC:2.7.7.7] K03701 uvrA; excinuclease ABC subunit A K03702 uvrB; excinuclease ABC subunit B K03703 uvrC; excinuclease ABC subunit C K05984 cho; excinuclease Cho [EC:3.1.25.-] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] K03555 mutS; DNA mismatch repair protein MutS K03572 mutL; DNA mismatch repair protein MutL K03573 mutH; DNA mismatch repair protein MutH K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] K03111 ssb; single-strand DNA-binding protein K06223 dam; DNA adenine methylase [EC:2.1.1.72] K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] K03553 recA; recombination protein RecA K03550 ruvA; holliday junction DNA helicase RuvA K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] K02686 priB; primosomal replication protein N K04067 priC; primosomal replication protein N'' K02317 dnaT; DNA replication protein DnaT K03546 sbcC; DNA repair protein SbcC/Rad50 K03547 sbcD; DNA repair protein SbcD/Mre11 K04485 radA; DNA repair protein RadA/Sms K03629 recF; DNA replication and repair protein RecF K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] K03584 recO; DNA repair protein RecO (recombination protein O) K06187 recR; recombination protein RecR K03631 recN; DNA repair protein RecN (Recombination protein N) K03554 rdgC; recombination associated protein RdgC K03554 rdgC; recombination associated protein RdgC K15342 cas1; CRISP-associated protein Cas1 K19789 radD; DNA repair protein RadD K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] K03168 topA; DNA topoisomerase I [EC:5.6.2.1] K05787 hupA; DNA-binding protein HU-alpha K03530 hupB; DNA-binding protein HU-beta K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein K04764 ihfA; integration host factor subunit alpha K05788 ihfB; integration host factor subunit beta K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] K03746 hns; DNA-binding protein H-NS K02346 dinB; DNA polymerase IV [EC:2.7.7.7] K03502 umuC; DNA polymerase V K03502 umuC; DNA polymerase V K03503 umuD; DNA polymerase V [EC:3.4.21.-] K03503 umuD; DNA polymerase V [EC:3.4.21.-] K01356 lexA; repressor LexA [EC:3.4.21.88] K01356 lexA; repressor LexA [EC:3.4.21.88] K02336 polB; DNA polymerase II [EC:2.7.7.7] K12149 dinI; DNA-damage-inducible protein I K03565 recX; regulatory protein K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] K03658 helD; DNA helicase IV [EC:5.6.2.4] K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
03029 Mitochondrial biogenesis [BR:esa03029]
09183 Protein families: signaling and cellular processes
09185 Viral protein families
09184 RNA family
09190 Not Included in Pathway or Brite