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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:eso03030]
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03410 Base excision repair [PATH:eso03410]
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03420 Nucleotide excision repair [PATH:eso03420]
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03430 Mismatch repair [PATH:eso03430]
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03440 Homologous recombination [PATH:eso03440]
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 O3O_20640 ssDNA exonuclease RecJ
O3O_01800 single-stranded DNA-binding protein
O3O_18025 hypothetical protein
O3O_25605 recF; recombination protein F
O3O_19065 recO; DNA repair protein RecO
O3O_06165 recR; recombination protein RecR
O3O_19565 recA; recombinase A
O3O_00765 DNA polymerase I
O3O_15000 ruvA; Holliday junction DNA helicase RuvA
O3O_14995 ruvB; Holliday junction DNA helicase RuvB
O3O_15010 ruvC; Holliday junction resolvase
O3O_25090 ATP-dependent DNA helicase RecG
O3O_20240 recB; exonuclease V subunit beta
O3O_20250 recC; exonuclease V subunit gamma
O3O_20235 recD; exonuclease V subunit alpha
O3O_04730 dnaE; DNA polymerase III subunit alpha
O3O_25610 DNA polymerase III subunit beta
O3O_06155 DNA polymerase III subunits gamma and tau
O3O_06905 holA; DNA polymerase III subunit delta
O3O_10235 DNA polymerase III subunit delta'
O3O_04870 DNA polymerase III subunit epsilon
O3O_14895 DNA polymerase III subunit theta
O3O_03050 DNA polymerase III subunit chi
O3O_03690 DNA polymerase III subunit psi
O3O_01150 primosome assembly protein PriA
O3O_02755 primosomal replication protein N
O3O_06140 primosomal replication protein N''
O3O_03650 primosomal protein DnaI
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04067 priC; primosomal replication protein N''
K02317 dnaT; DNA replication protein DnaT
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:eso03000]
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03021 Transcription machinery [BR:eso03021]
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03019 Messenger RNA biogenesis [BR:eso03019]
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03041 Spliceosome
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03011 Ribosome [BR:eso03011]
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03009 Ribosome biogenesis [BR:eso03009]
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03016 Transfer RNA biogenesis [BR:eso03016]
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03012 Translation factors [BR:eso03012]
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03110 Chaperones and folding catalysts [BR:eso03110]
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04131 Membrane trafficking [BR:eso04131]
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04121 Ubiquitin system [BR:eso04121]
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03051 Proteasome [BR:eso03051]
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03032 DNA replication proteins [BR:eso03032]
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03036 Chromosome and associated proteins [BR:eso03036]
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03400 DNA repair and recombination proteins [BR:eso03400]
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O3O_11980 O-6-alkylguanine-DNA:cysteine-protein methyltransferase
O3O_07185 deoxyribodipyrimidine photolyase
O3O_19145 uracil-DNA glycosylase
O3O_21010 adenine DNA glycosylase
O3O_13565 endonuclease III
O3O_04325 nucleoside triphosphate pyrophosphohydrolase
O3O_25030 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
O3O_17255 bifunctional DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase
O3O_17250 alpha-ketoglutarate-dependent dioxygenase AlkB
O3O_22035 G/U mismatch-specific DNA glycosylase
O3O_16535 3-methyl-adenine DNA glycosylase II
O3O_24560 3-methyl-adenine DNA glycosylase I
O3O_25005 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
O3O_07215 endonuclease VIII
O3O_14400 exonuclease III
O3O_16985 endonuclease IV
O3O_01480 endonuclease V
O3O_20640 ssDNA exonuclease RecJ
O3O_25065 ligB; NAD-dependent DNA ligase LigB
O3O_18305 ligA; NAD-dependent DNA ligase LigA
O3O_00765 DNA polymerase I
O3O_01795 uvrA; excinuclease ABC subunit A
O3O_07820 excinuclease ABC subunit B
O3O_15560 uvrC; excinuclease ABC subunit C
O3O_14360 nucleotide excision repair endonuclease
O3O_00540 uvrD; DNA-dependent helicase II
O3O_01420 rpoB; DNA-directed RNA polymerase subunit beta
O3O_01425 DNA-directed RNA polymerase subunit beta'
O3O_23125 DNA-directed RNA polymerase subunit alpha
O3O_25075 rpoZ; DNA-directed RNA polymerase subunit omega
O3O_10310 transcription-repair coupling factor
O3O_19760 DNA mismatch repair protein MutS
O3O_02590 mutL; DNA mismatch repair protein
O3O_20295 DNA mismatch repair protein
O3O_16260 sbcB; exonuclease I
O3O_18780 xseA; exodeoxyribonuclease VII large subunit
O3O_05900 exodeoxyribonuclease VII small subunit
O3O_14905 exodeoxyribonuclease X
O3O_04730 dnaE; DNA polymerase III subunit alpha
O3O_25610 DNA polymerase III subunit beta
O3O_03050 DNA polymerase III subunit chi
O3O_06905 holA; DNA polymerase III subunit delta
O3O_10235 DNA polymerase III subunit delta'
O3O_04870 DNA polymerase III subunit epsilon
O3O_06155 DNA polymerase III subunits gamma and tau
O3O_03690 DNA polymerase III subunit psi
O3O_14895 DNA polymerase III subunit theta
O3O_01800 single-stranded DNA-binding protein
O3O_18025 hypothetical protein
O3O_23515 DNA adenine methylase
O3O_15795 very short patch repair protein
O3O_20240 recB; exonuclease V subunit beta
O3O_20250 recC; exonuclease V subunit gamma
O3O_20235 recD; exonuclease V subunit alpha
O3O_19565 recA; recombinase A
O3O_15000 ruvA; Holliday junction DNA helicase RuvA
O3O_14995 ruvB; Holliday junction DNA helicase RuvB
O3O_15010 ruvC; Holliday junction resolvase
O3O_07605 endodeoxyribonuclease RUS
O3O_15245 putative Crossover junction endodeoxyribonuclease
O3O_13165 crossover junction endodeoxyribonuclease
O3O_10505 holliday junction resolvase
O3O_11340 holliday junction resolvase
O3O_01150 primosome assembly protein PriA
O3O_02755 primosomal replication protein N
O3O_06140 primosomal replication protein N''
O3O_03650 primosomal protein DnaI
O3O_05765 exonuclease subunit SbcC
O3O_05770 exonuclease subunit SbcD
O3O_03780 DNA repair protein RadA
O3O_25605 recF; recombination protein F
O3O_25090 ATP-dependent DNA helicase RecG
O3O_19065 recO; DNA repair protein RecO
O3O_06165 recR; recombination protein RecR
O3O_19295 recombination and repair protein
O3O_05750 exonuclease RdgC
O3O_19895 CRISPR-associated protein Cas1
O3O_17115 nucleic acid ATP-dependent helicase
O3O_03070 ATPase
O3O_17310 DNA gyrase subunit A
O3O_25600 gyrB; DNA gyrase subunit B
O3O_11645 DNA topoisomerase I subunit omega
O3O_01490 transcriptional regulator HU subunit alpha
O3O_06010 transcriptional regulator HU subunit beta
O3O_10375 Exodeoxyribonuclease VIII from bacteriophage origin
O3O_09075 DNA recombination protein Bet
O3O_22985 fis; global DNA-binding transcriptional dual regulator Fis
O3O_14210 ihfA; integration host factor subunit alpha
O3O_08500 ihfB; integration host factor subunit beta
O3O_00590 ATP-dependent DNA helicase RecQ
O3O_11150 global DNA-binding transcriptional dual regulator H-NS
O3O_05080 DNA polymerase IV
O3O_10880 umuC; DNA polymerase V subunit UmuC
O3O_26327 umuC; DNA polymerase V subunit UmuC
O3O_10875 DNA polymerase V subunit UmuD
O3O_26322 putative UV protection protein
O3O_01715 LexA repressor
O3O_15250 LexA repressor
O3O_04130 DNA polymerase II
O3O_25055 dinD; DNA-damage-inducible protein D
O3O_10045 DNA damage-inducible protein I
O3O_15040 DNA-damage-inducible protein
O3O_19560 recX; recombination regulator RecX
O3O_23645 putative transposase
O3O_17665 putative transposase
O3O_04480 putative transposase
O3O_03550 transposase
O3O_17380 hypothetical protein
O3O_00360 ATP-dependent DNA helicase Rep
O3O_08765 helD; DNA helicase IV
O3O_14715 Helicase c2
O3O_07935 dinG; ATP-dependent DNA helicase DinG
O3O_13670 putative ATP-dependent helicase Lhr
O3O_19470 ribonucleotide-diphosphate reductase subunit alpha
O3O_17325 ribonucleotide-diphosphate reductase subunit alpha
O3O_17330 nrdB; ribonucleotide-diphosphate reductase subunit beta
O3O_19475 nrdF; ribonucleotide-diphosphate reductase subunit beta
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K05984 cho; excinuclease Cho [EC:3.1.25.-]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03573 mutH; DNA mismatch repair protein MutH
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04067 priC; primosomal replication protein N''
K02317 dnaT; DNA replication protein DnaT
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K15342 cas1; CRISP-associated protein Cas1
K19789 radD; DNA repair protein RadD
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K05787 hupA; DNA-binding protein HU-alpha
K03530 hupB; DNA-binding protein HU-beta
K10906 recE; exodeoxyribonuclease VIII [EC:3.1.11.-]
K07455 recT; recombination protein RecT
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03746 hns; DNA-binding protein H-NS
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K03502 umuC; DNA polymerase V
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K02336 polB; DNA polymerase II [EC:2.7.7.7]
K14623 dinD; DNA-damage-inducible protein D
K12149 dinI; DNA-damage-inducible protein I
K12149 dinI; DNA-damage-inducible protein I
K03565 recX; regulatory protein
K01157 rpnA; recombination-promoting nuclease RpnA [EC:3.1.21.-]
K24087 rpnB; recombination-promoting nuclease RpnB [EC:3.1.21.-]
K24088 rpnC; recombination-promoting nuclease RpnC [EC:3.1.21.-]
K24089 rpnD; recombination-promoting nuclease RpnD [EC:3.1.21.-]
K24090 rpnE; recombination-promoting nuclease RpnE
K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
K03658 helD; DNA helicase IV [EC:5.6.2.4]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:eso03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Escherichia coli O104:H4 2009EL-2071 (EAEC)