| |
KO |
 Eukaryotic type
|
 mRNA processing factors
|
mRNA surveillance and transport factors
|
Transport factors
|
EJC complex
|
TREX complex
|
TREX-2 complex
|
Nuclear pore complex
|
Ran-mediated transport factors
|
eIF4F and regulatory proteins
|
 101080377 EIF4E; eukaryotic translation initiation factor 4E isoform X2
101099142 EIF4E2; eukaryotic translation initiation factor 4E type 2 isoform X1
101088140 EIF4E1B; eukaryotic translation initiation factor 4E type 1B
101098327 EIF4A2; eukaryotic initiation factor 4A-II
101098175 EIF4A1; eukaryotic initiation factor 4A-I
101085654 EIF4G1; eukaryotic translation initiation factor 4 gamma 1 isoform X4
101089295 EIF4G2; eukaryotic translation initiation factor 4 gamma 2
101093533 EIF4G3; eukaryotic translation initiation factor 4 gamma 3 isoform X2
101081817 EIF4B; eukaryotic translation initiation factor 4B isoform X3
101098106 EIF4H; eukaryotic translation initiation factor 4H isoform X1
101088571 EIF4EBP1; eukaryotic translation initiation factor 4E-binding protein 1
101099906 EIF4EBP2; eukaryotic translation initiation factor 4E-binding protein 2
101094646 EIF4EBP3; eukaryotic translation initiation factor 4E-binding protein 3
101098583 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter isoform X1
101097864 ANGEL2; protein angel homolog 2 isoform X1
101084546 ANGEL1; protein angel homolog 1 isoform X1
101080266 FMR1; synaptic functional regulator FMR1 isoform X10
101093590 FXR1; fragile X mental retardation syndrome-related protein 1 isoform X3
101099255 FXR2; fragile X mental retardation syndrome-related protein 2
101089755 CYFIP1; cytoplasmic FMR1-interacting protein 1 isoform X1
101101031 CYFIP2; cytoplasmic FMR1-interacting protein 2 isoform X3
101083146 GEMIN5; gem-associated protein 5
101082651 TACC3; transforming acidic coiled-coil-containing protein 3 isoform X3
101098542 CPEB1; cytoplasmic polyadenylation element-binding protein 1 isoform X7
101084993 CPEB3; cytoplasmic polyadenylation element-binding protein 3 isoform X1
101089920 CPEB4; cytoplasmic polyadenylation element-binding protein 4 isoform X4
101100808 CPEB2; cytoplasmic polyadenylation element-binding protein 2 isoform X3
101090417 DDX3X; ATP-dependent RNA helicase DDX3X isoform X2
101093567 GIGYF1; GRB10-interacting GYF protein 1 isoform X3
101099393 GIGYF2; GRB10-interacting GYF protein 2 isoform X1
101089931 PABPC1L; polyadenylate-binding protein 1-like isoform X2
101095427 PABPC4; polyadenylate-binding protein 4 isoform X1
105260217 PABPC1L2B; polyadenylate-binding protein 1-like 2
101080709 PABPC4L; polyadenylate-binding protein 4-like
101083238 PABPC1; polyadenylate-binding protein 1 isoform X1
111558721 polyadenylate-binding protein 1-like 2
101099028 PABPC5; polyadenylate-binding protein 5
101092995 PAIP1; polyadenylate-binding protein-interacting protein 1 isoform X3
101090413 PAIP2; polyadenylate-binding protein-interacting protein 2
101099038 PAIP2B; polyadenylate-binding protein-interacting protein 2B isoform X2
101093271 SKIV2L; helicase SKI2W isoform X2
101083547 DEAF1; deformed epidermal autoregulatory factor 1 homolog isoform X1
101097564 malignant T-cell-amplified sequence 1
101091229 DENR; density-regulated protein isoform X1
|
K03259 EIF4E; translation initiation factor 4E
K03259 EIF4E; translation initiation factor 4E
K03259 EIF4E; translation initiation factor 4E
K03257 EIF4A; translation initiation factor 4A
K03257 EIF4A; translation initiation factor 4A
K03260 EIF4G; translation initiation factor 4G
K03260 EIF4G; translation initiation factor 4G
K03260 EIF4G; translation initiation factor 4G
K03258 EIF4B; translation initiation factor 4B
K24086 EIF4H; translation initiation factor 4H
K07205 EIF4EBP1; eukaryotic translation initiation factor 4E binding protein 1
K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2
K18645 EIF4EBP3; eukaryotic translation initiation factor 4E binding protein 3
K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
K18729 ANGEL; protein angel
K18729 ANGEL; protein angel
K15516 FMR; fragile X mental retardation protein
K15516 FMR; fragile X mental retardation protein
K15516 FMR; fragile X mental retardation protein
K05749 CYFIP; cytoplasmic FMR1 interacting protein
K05749 CYFIP; cytoplasmic FMR1 interacting protein
K13133 GEMIN5; gem associated protein 5
K14283 TACC3; transforming acidic coiled-coil-containing protein 3
K02602 CPEB; cytoplasmic polyadenylation element-binding protein
K02602 CPEB; cytoplasmic polyadenylation element-binding protein
K02602 CPEB; cytoplasmic polyadenylation element-binding protein
K02602 CPEB; cytoplasmic polyadenylation element-binding protein
K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:3.6.4.13]
K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
K13126 PABPC; polyadenylate-binding protein
K13126 PABPC; polyadenylate-binding protein
K13126 PABPC; polyadenylate-binding protein
K13126 PABPC; polyadenylate-binding protein
K13126 PABPC; polyadenylate-binding protein
K13126 PABPC; polyadenylate-binding protein
K13126 PABPC; polyadenylate-binding protein
K14322 PAIP1; polyadenylate-binding protein-interacting protein 1
K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
K12599 SKI2; antiviral helicase SKI2 [EC:3.6.4.13]
K23041 DEAF1; deformed epidermal autoregulatory factor 1
K07575 MCTS; malignant T-cell-amplified sequence
K24272 DENR; density-regulated protein
|
APOBEC1-ACF complex
|
Other transport factors
|
Surveillance factors
|
Factors involved in mRNA localization
|
mRNA cycle factors
|
Common to processing body (P body) and stress granule
|
101097088 XRN1; 5'-3' exoribonuclease 1 isoform X1
101087079 AGO3; protein argonaute-3 isoform X1
101086581 AGO1; protein argonaute-1 isoform X2
101086325 AGO4; protein argonaute-4
101084935 AGO2; protein argonaute-2 isoform X1
101080377 EIF4E; eukaryotic translation initiation factor 4E isoform X2
101099142 EIF4E2; eukaryotic translation initiation factor 4E type 2 isoform X1
101088140 EIF4E1B; eukaryotic translation initiation factor 4E type 1B
101096043 UPF1; regulator of nonsense transcripts 1 isoform X1
101090417 DDX3X; ATP-dependent RNA helicase DDX3X isoform X2
101092208 DDX6; probable ATP-dependent RNA helicase DDX6
101088243 MEX3B; RNA-binding protein MEX3B
101095137 MEX3C; RNA-binding E3 ubiquitin-protein ligase MEX3C
101086447 MEX3A; RNA-binding protein MEX3A
105261119 MEX3D; RNA-binding protein MEX3D
101082140 FASTK; fas-activated serine/threonine kinase isoform X2
101082612 LSM14A; protein LSM14 homolog A isoform X1
101085197 LSM14B; protein LSM14 homolog B isoform X1
101095571 PCBP1; poly(rC)-binding protein 1
101086733 PCBP2; poly(rC)-binding protein 2 isoform X22
102900263 YBX1; Y-box-binding protein 1 isoform X1
101082110 Wilms tumor protein 1-interacting protein
101092500 LIMD1; LIM domain-containing protein 1 isoform X1
101092118 AJUBA; LIM domain-containing protein ajuba
101100896 APOBEC1; C->U-editing enzyme APOBEC-1
100127022 APOBEC3Z3; DNA dC->dU-editing enzyme APOBEC-3H
101081152 MOV10; helicase MOV-10 isoform X2
101100494 PNRC2; proline-rich nuclear receptor coactivator 2
101096201 TNPO1; transportin-1 isoform X1
101096436 SMG1; serine/threonine-protein kinase SMG1 isoform X1
101085434 SMG5; protein SMG5 isoform X3
101099159 SMG6; telomerase-binding protein EST1A isoform X1
101088454 SMG7; protein SMG7 isoform X7
101096862 ZFP36; mRNA decay activator protein ZFP36
101097563 ZFP36L1; mRNA decay activator protein ZFP36L1
101098532 ZFP36L2; mRNA decay activator protein ZFP36L2
100379627 LIN28A; protein lin-28 homolog A
101090940 LIN28B; protein lin-28 homolog B isoform X1
101086476 HTT; LOW QUALITY PROTEIN: huntingtin
101087586 IPO8; importin-8 isoform X1
101099836 BICC1; protein bicaudal C homolog 1 isoform X1
101092031 HNRNPA1; heterogeneous nuclear ribonucleoprotein A1 isoform X2
101087915 heterogeneous nuclear ribonucleoprotein A1-like
101098397 HNRNPA3; heterogeneous nuclear ribonucleoprotein A3 isoform X1
101085976 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like
101090873 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like
101096798 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like
101088078 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A3-like
101090494 PRKACA; cAMP-dependent protein kinase catalytic subunit alpha isoform X3
101095353 PRKACB; cAMP-dependent protein kinase catalytic subunit beta isoform X1
101096204 LARP1; la-related protein 1 isoform X1
101083078 LARP1B; la-related protein 1B isoform X1
101094314 ATXN2L; ataxin-2-like protein isoform X13
101101418 ATXN2; ataxin-2 isoform X5
|
K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
K11593 ELF2C; eukaryotic translation initiation factor 2C
K11593 ELF2C; eukaryotic translation initiation factor 2C
K11593 ELF2C; eukaryotic translation initiation factor 2C
K11593 ELF2C; eukaryotic translation initiation factor 2C
K03259 EIF4E; translation initiation factor 4E
K03259 EIF4E; translation initiation factor 4E
K03259 EIF4E; translation initiation factor 4E
K14326 UPF1; regulator of nonsense transcripts 1 [EC:3.6.4.13 5.6.2.3]
K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:3.6.4.13]
K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13]
K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
K08290 FASTK; Fas-activated serine/threonine kinase [EC:2.7.11.8]
K18749 LSM14; protein LSM14
K18749 LSM14; protein LSM14
K12889 PCBP1; poly(rC)-binding protein 1
K13162 PCBP2; poly(rC)-binding protein 2
K09276 YBX1; Y-box-binding protein 1
K16682 AJUBA; LIM domain-containing protein
K16682 AJUBA; LIM domain-containing protein
K16682 AJUBA; LIM domain-containing protein
K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36]
K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
K18422 MOV10; helicase MOV-10 [EC:3.6.4.13]
K18751 PNRC2; proline-rich nuclear receptor coactivator 2
K18752 TNPO1; transportin-1
K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
K11125 SMG5; protein SMG5
K11124 SMG6; protein SMG6 [EC:3.1.-.-]
K14409 SMG7; protein SMG7
K15308 TTP; tristetraprolin
K18753 ZFP36L; butyrate response factor
K18753 ZFP36L; butyrate response factor
K18754 LIN28; protein lin-28
K18754 LIN28; protein lin-28
K04533 HD; huntingtin
K18755 IPO8; importin-8
K18756 BICC1; protein bicaudal C
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
K04345 PKA; protein kinase A [EC:2.7.11.11]
K04345 PKA; protein kinase A [EC:2.7.11.11]
K18757 LARP1; la-related protein 1
K18757 LARP1; la-related protein 1
K23625 ATXN2_2L; ataxin 2/2L
K23625 ATXN2_2L; ataxin 2/2L
|
P-body specific factors
|
Stress granule specific factors
|
mRNA degradation factors
|
|
|
Prokaryotic type
|
Messenger RNA Biogenesis - Felis catus (domestic cat)