| |
KO |
 09100 Metabolism
|
|
|
 09120 Genetic Information Processing
|
|
|
09121 Transcription
|
|
|
09122 Translation
|
|
|
09123 Folding, sorting and degradation
|
|
|
09124 Replication and repair
|
03030 DNA replication [PATH:fli03030]
|
03410 Base excision repair [PATH:fli03410]
|
03420 Nucleotide excision repair [PATH:fli03420]
|
03430 Mismatch repair [PATH:fli03430]
|
03440 Homologous recombination [PATH:fli03440]
|
 Fleli_1292 exonuclease RecJ
Fleli_2089 single stranded DNA-binding protein
Fleli_0253 single stranded DNA-binding protein
Fleli_2327 single stranded DNA-binding protein
Fleli_0469 DNA replication and repair protein RecF
Fleli_3768 DNA replication and repair protein RecO
Fleli_2085 DNA replication and repair protein RecR
Fleli_1089 protein RecA
Fleli_2405 Holliday junction DNA helicase subunit RuvA
Fleli_2839 Holliday junction DNA helicase subunit RuvB
Fleli_0085 Holliday junction endonuclease RuvC
Fleli_3135 ATP-dependent DNA helicase RecG
Fleli_1691 DNA-directed DNA polymerase III PolC
Fleli_2921 DNA polymerase III, beta subunit
Fleli_3859 DNA polymerase III, subunit gamma/tau
Fleli_3685 DNA polymerase III, delta subunit
Fleli_2533 DNA polymerase III, gamma/tau subunit
Fleli_0168 DNA polymerase III epsilon subunit-like 3'-5' exonuclease
Fleli_1762 DNA polymerase III epsilon subunit-like 3'-5' exonuclease
Fleli_3592 DNA polymerase III epsilon subunit-like 3'-5' exonuclease
Fleli_1489 replication restart DNA helicase PriA
|
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
|
03450 Non-homologous end-joining
|
03460 Fanconi anemia pathway
|
|
|
09126 Chromosome
|
|
|
09125 Information processing in viruses
|
|
|
09130 Environmental Information Processing
|
|
|
09140 Cellular Processes
|
|
|
09150 Organismal Systems
|
|
|
09160 Human Diseases
|
|
|
09180 Brite Hierarchies
|
|
|
09181 Protein families: metabolism
|
|
|
09182 Protein families: genetic information processing
|
03000 Transcription factors [BR:fli03000]
|
03021 Transcription machinery [BR:fli03021]
|
03019 Messenger RNA biogenesis [BR:fli03019]
|
03041 Spliceosome [BR:fli03041]
|
03011 Ribosome [BR:fli03011]
|
03009 Ribosome biogenesis [BR:fli03009]
|
03016 Transfer RNA biogenesis [BR:fli03016]
|
03012 Translation factors [BR:fli03012]
|
03110 Chaperones and folding catalysts [BR:fli03110]
|
04131 Membrane trafficking [BR:fli04131]
|
04121 Ubiquitin system [BR:fli04121]
|
03051 Proteasome [BR:fli03051]
|
03032 DNA replication proteins [BR:fli03032]
|
03036 Chromosome and associated proteins [BR:fli03036]
|
03400 DNA repair and recombination proteins [BR:fli03400]
|
Fleli_1976 deoxyribodipyrimidine photolyase
Fleli_0856 Uracil-DNA glycosylase
Fleli_2088 A/G-specific DNA-adenine glycosylase
Fleli_2187 endonuclease III, DNA-(apurinic or apyrimidinic site) lyase
Fleli_0938 poly(ADP-ribose) polymerase-like protein
Fleli_3964 ADP-ribose pyrophosphatase
Fleli_1206 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
Fleli_1726 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
Fleli_0534 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
Fleli_2556 exodeoxyribonuclease III
Fleli_2068 deoxyinosine 3'endonuclease (endonuclease V)
Fleli_1292 exonuclease RecJ
Fleli_3755 DNA ligase, NAD-dependent
Fleli_1300 excinuclease ABC, A subunit
Fleli_3719 excinuclease ABC, A subunit
Fleli_2794 Excinuclease ABC subunit B
Fleli_1095 Excinuclease ABC subunit C
Fleli_1007 DNA/RNA helicase, superfamily I
Fleli_0747 DNA-directed RNA polymerase subunit beta
Fleli_2255 DNA-directed RNA polymerase subunit beta'
Fleli_3040 DNA-directed RNA polymerase, alpha subunit
Fleli_1849 transcription-repair coupling factor Mfd
Fleli_2634 DNA mismatch repair protein MutS
Fleli_3281 MutS2 family protein
Fleli_0612 DNA mismatch repair protein MutL
Fleli_1691 DNA-directed DNA polymerase III PolC
Fleli_2921 DNA polymerase III, beta subunit
Fleli_3685 DNA polymerase III, delta subunit
Fleli_2533 DNA polymerase III, gamma/tau subunit
Fleli_0168 DNA polymerase III epsilon subunit-like 3'-5' exonuclease
Fleli_1762 DNA polymerase III epsilon subunit-like 3'-5' exonuclease
Fleli_3592 DNA polymerase III epsilon subunit-like 3'-5' exonuclease
Fleli_3859 DNA polymerase III, subunit gamma/tau
Fleli_2089 single stranded DNA-binding protein
Fleli_0253 single stranded DNA-binding protein
Fleli_2327 single stranded DNA-binding protein
Fleli_3617 DNA adenine methylase Dam
Fleli_1089 protein RecA
Fleli_2405 Holliday junction DNA helicase subunit RuvA
Fleli_2839 Holliday junction DNA helicase subunit RuvB
Fleli_0085 Holliday junction endonuclease RuvC
Fleli_1489 replication restart DNA helicase PriA
Fleli_2483 ATPase involved in DNA repair
Fleli_1567 Exodeoxyribonuclease I subunit D
Fleli_3583 DNA repair protein RadA
Fleli_0469 DNA replication and repair protein RecF
Fleli_3135 ATP-dependent DNA helicase RecG
Fleli_3768 DNA replication and repair protein RecO
Fleli_2085 DNA replication and repair protein RecR
Fleli_1115 DNA replication and repair protein RecN
Fleli_0013 CRISPR-associated endonuclease Cas1
Fleli_2417 DNA gyrase subunit A
Fleli_0653 DNA gyrase subunit B
Fleli_0360 DNA topoisomerase I, bacterial
Fleli_1631 bacterial nucleoid DNA-binding protein
Fleli_0580 ATP-dependent DNA helicase RecQ
Fleli_0736 ATP-dependent DNA helicase, RecQ family
Fleli_3941 ATP-dependent DNA helicase RecQ
Fleli_3649 hypothetical protein
Fleli_1485 hypothetical protein
Fleli_1316 PHP family phosphohydrolase, histidinol phosphatase
Fleli_1593 ribonucleoside-diphosphate reductase, alpha subunit
Fleli_2243 ribonucleotide reductase, beta subunit
Fleli_0741 exopolyphosphatase-like enzyme
|
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K15342 cas1; CRISP-associated protein Cas1
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K14623 dinD; DNA-damage-inducible protein D
K03565 recX; regulatory protein
K02347 polX; DNA polymerase (family X)
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
|
03029 Mitochondrial biogenesis [BR:fli03029]
|
|
|
09183 Protein families: signaling and cellular processes
|
|
|
09185 Viral protein families
|
|
|
09184 RNA family
|
|
|
09190 Not Included in Pathway or Brite
|
KEGG Orthology (KO) - Bernardetia litoralis