| |
KO |
 09100 Metabolism
|
|
|
 09120 Genetic Information Processing
|
|
|
09121 Transcription
|
|
|
09122 Translation
|
|
|
09123 Folding, sorting and degradation
|
|
|
09124 Replication and repair
|
03030 DNA replication [PATH:fma03030]
|
03410 Base excision repair [PATH:fma03410]
|
03420 Nucleotide excision repair [PATH:fma03420]
|
03430 Mismatch repair [PATH:fma03430]
|
03440 Homologous recombination [PATH:fma03440]
|
 FMG_0811 single-strand DNA-specific exonuclease
FMG_1140 phage-related single-strand DNA-binding protein
FMG_P0012 single-strand binding protein
FMG_P0064 single-strand binding protein
FMG_P0029 single-strand binding protein
FMG_0004 DNA replication and repair protein
FMG_0514 recombination protein
FMG_0757 recombinase A
FMG_0343 DNA polymerase I
FMG_0816 holliday junction DNA helicase
FMG_0815 holliday junction DNA helicase
FMG_0817 crossover junction endodeoxyribonuclease
FMG_0675 ATP-dependent helicase
FMG_1499 ATP-dependent exodeoxyribonuclease alpha subunit
FMG_1003 DNA polymerase III alpha subunit
FMG_0731 DNA polymerase III alpha subunit
FMG_0002 DNA polymerase III beta subunit
FMG_0512 DNA polymerase III subunits gamma and tau
FMG_0787 putative DNA polymerase III delta subunit
FMG_1126 putative DNA polymerase III delta subunit
FMG_0660 primosomal protein N
|
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
|
03450 Non-homologous end-joining
|
03460 Fanconi anemia pathway
|
|
|
09126 Chromosome
|
|
|
09125 Information processing in viruses
|
|
|
09130 Environmental Information Processing
|
|
|
09140 Cellular Processes
|
|
|
09150 Organismal Systems
|
|
|
09160 Human Diseases
|
|
|
09180 Brite Hierarchies
|
|
|
09181 Protein families: metabolism
|
|
|
09182 Protein families: genetic information processing
|
03000 Transcription factors [BR:fma03000]
|
03021 Transcription machinery [BR:fma03021]
|
03019 Messenger RNA biogenesis [BR:fma03019]
|
03041 Spliceosome
|
03011 Ribosome [BR:fma03011]
|
03009 Ribosome biogenesis [BR:fma03009]
|
03016 Transfer RNA biogenesis [BR:fma03016]
|
03012 Translation factors [BR:fma03012]
|
03110 Chaperones and folding catalysts [BR:fma03110]
|
04131 Membrane trafficking [BR:fma04131]
|
04121 Ubiquitin system
|
03051 Proteasome
|
03032 DNA replication proteins [BR:fma03032]
|
03036 Chromosome and associated proteins [BR:fma03036]
|
03400 DNA repair and recombination proteins [BR:fma03400]
|
FMG_1254 methylated DNA-protein cysteine S-methyltransferase
FMG_0640 uracil-DNA glycosylase
FMG_0888 putative 8-oxoguanine DNA glycosylase
FMG_0719 endonuclease III
FMG_1294 ATP dependent helicase
FMG_0294 mutator protein MutT/nudix family
FMG_0760 deoxyuridine 5'-triphosphate nucleotidohydrolase
FMG_P0074 deoxyuridine 5'-triphosphate nucleotidohydrolase
FMG_0258 exodeoxyribonuclease III
FMG_0718 endonuclease IV
FMG_0811 single-strand DNA-specific exonuclease
FMG_0569 NAD-dependent DNA ligase
FMG_0343 DNA polymerase I
FMG_0900 excinuclease ABC subunit A
FMG_0901 UvrABC system protein B
FMG_0375 excinuclease ABC subunit C
FMG_0568 ATP-dependent DNA helicase
FMG_0647 DNA helicase II
FMG_0949 ATP-dependent DNA helicase
FMG_1118 DNA-directed RNA polymerase beta subunit
FMG_1117 DNA-directed RNA polymerase beta' subunit
FMG_0181 DNA-directed RNA polymerase alpha subunit
FMG_0658 putative DNA-directed RNA polymerase omega subunit
FMG_0481 transcription-repair coupling factor
FMG_0743 DNA mismatch repair protein
FMG_0864 DNA mismatch repair protein
FMG_0744 DNA mismatch repair protein
FMG_0842 exodeoxyribonuclease VII large subunit
FMG_0841 putative exodeoxyribonuclease VII small subunit
FMG_1003 DNA polymerase III alpha subunit
FMG_0731 DNA polymerase III alpha subunit
FMG_0002 DNA polymerase III beta subunit
FMG_0787 putative DNA polymerase III delta subunit
FMG_1126 putative DNA polymerase III delta subunit
FMG_0512 DNA polymerase III subunits gamma and tau
FMG_1140 phage-related single-strand DNA-binding protein
FMG_P0012 single-strand binding protein
FMG_P0064 single-strand binding protein
FMG_P0029 single-strand binding protein
FMG_1499 ATP-dependent exodeoxyribonuclease alpha subunit
FMG_0757 recombinase A
FMG_0816 holliday junction DNA helicase
FMG_0815 holliday junction DNA helicase
FMG_0817 crossover junction endodeoxyribonuclease
FMG_0660 primosomal protein N
FMG_0755 exonuclease SbcC homolog
FMG_0701 putative phosphoesterase
FMG_0756 putative phosphoesterase
FMG_0336 DNA repair protein
FMG_0004 DNA replication and repair protein
FMG_0675 ATP-dependent helicase
FMG_0514 recombination protein
FMG_0837 DNA repair and genetic recombination protein
FMG_0059 conserved hypothetical protein
FMG_0284 conserved hypothetical protein
FMG_0006 DNA gyrase A subunit
FMG_0005 DNA gyrase B subunit
FMG_0705 topoisomerase I
FMG_0483 DNA binding protein
FMG_0277 DNA polymerase IV
FMG_0221 DNA-damage repair protein
FMG_0747 transcriptional repressor
FMG_0699 regulatory protein
FMG_1316 ribonucleoside-diphosphate reductase alpha subunit
FMG_1236 ribonucleoside-diphosphate reductase beta subunit
FMG_0765 exopolyphosphatase family proteins
|
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K15342 cas1; CRISP-associated protein Cas1
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
|
03029 Mitochondrial biogenesis [BR:fma03029]
|
|
|
09183 Protein families: signaling and cellular processes
|
|
|
09185 Viral protein families
|
|
|
09184 RNA family
|
|
|
09190 Not Included in Pathway or Brite
|
KEGG Orthology (KO) - Finegoldia magna