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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:fsy03030]
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03410 Base excision repair [PATH:fsy03410]
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03420 Nucleotide excision repair [PATH:fsy03420]
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03430 Mismatch repair [PATH:fsy03430]
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03440 Homologous recombination [PATH:fsy03440]
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 FsymDg_3726 single-strand binding protein
FsymDg_1480 single-strand binding protein
FsymDg_0122 single-strand binding protein
FsymDg_4360 single-strand binding protein
FsymDg_4521 single-strand binding protein
FsymDg_4554 single-strand binding protein
FsymDg_0008 DNA replication and repair protein recF
FsymDg_1629 DNA repair protein recO
FsymDg_0591 Recombination protein recR
FsymDg_3610 Protein recA
FsymDg_2135 DNA polymerase I
FsymDg_2550 Holliday junction ATP-dependent DNA helicase ruvA
FsymDg_2549 Holliday junction ATP-dependent DNA helicase ruvB
FsymDg_2551 Crossover junction endodeoxyribonuclease ruvC
FsymDg_1206 putative transcriptional regulator
FsymDg_0568 putative transcriptional regulator
FsymDg_3694 DEAD/DEAH box helicase domain protein
FsymDg_2776 helicase, RecD/TraA family
FsymDg_2268 Exodeoxyribonuclease V
FsymDg_3357 DNA polymerase III, alpha subunit
FsymDg_0007 DNA polymerase III, beta subunit
FsymDg_0598 DNA polymerase III, subunits gamma and tau
FsymDg_1611 DNA polymerase III, delta subunit
FsymDg_4342 DNA polymerase III, delta prime subunit
FsymDg_3175 DNA polymerase III, epsilon subunit
FsymDg_3308 primosome assembly protein PriA
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K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:fsy03000]
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03021 Transcription machinery [BR:fsy03021]
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03019 Messenger RNA biogenesis [BR:fsy03019]
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03041 Spliceosome
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03011 Ribosome [BR:fsy03011]
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03009 Ribosome biogenesis [BR:fsy03009]
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03016 Transfer RNA biogenesis [BR:fsy03016]
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03012 Translation factors [BR:fsy03012]
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03110 Chaperones and folding catalysts [BR:fsy03110]
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04131 Membrane trafficking [BR:fsy04131]
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04121 Ubiquitin system [BR:fsy04121]
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03051 Proteasome [BR:fsy03051]
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03032 DNA replication proteins [BR:fsy03032]
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03036 Chromosome and associated proteins [BR:fsy03036]
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03400 DNA repair and recombination proteins [BR:fsy03400]
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FsymDg_0189 methylated-DNA/protein-cysteine methyltransferase
FsymDg_3269 3-methyladenine DNA glycosylase
FsymDg_4286 HhH-GPD family protein
FsymDg_4314 endonuclease III
FsymDg_4447 helicase domain-containing protein
FsymDg_1280 NUDIX hydrolase
FsymDg_4364 NUDIX hydrolase
FsymDg_0831 NUDIX hydrolase
FsymDg_1234 NUDIX hydrolase
FsymDg_1478 NUDIX hydrolase
FsymDg_3530 NUDIX hydrolase
FsymDg_0199 NUDIX hydrolase
FsymDg_0875 NUDIX hydrolase
FsymDg_2720 NUDIX hydrolase
FsymDg_2254 NUDIX hydrolase
FsymDg_1265 NUDIX hydrolase
FsymDg_3779 NUDIX hydrolase
FsymDg_1808 Deoxyuridine 5'-triphosphate nucleotidohydrolase
FsymDg_0247 phage SPO1 DNA polymerase-related protein
FsymDg_0762 Uracil-DNA glycosylase superfamily
FsymDg_1005 DNA-3-methyladenine glycosylase I
FsymDg_3684 Formamidopyrimidine-DNA glycosylase
FsymDg_1514 exodeoxyribonuclease III Xth
FsymDg_3774 DNA ligase
FsymDg_2135 DNA polymerase I
FsymDg_2165 UvrABC system protein A
FsymDg_2144 UvrABC system protein B
FsymDg_2167 UvrABC system protein C
FsymDg_3898 ATP-dependent DNA helicase PcrA
FsymDg_0907 UvrD/REP helicase
FsymDg_0919 UvrD/REP helicase
FsymDg_3971 DNA-directed RNA polymerase subunit beta
FsymDg_3970 DNA-directed RNA polymerase subunit beta'
FsymDg_3933 DNA-directed RNA polymerase subunit alpha
FsymDg_3311 DNA-directed RNA polymerase subunit omega
FsymDg_0750 transcription-repair coupling factor
FsymDg_0814 Exodeoxyribonuclease 7 large subunit
FsymDg_0806 Exodeoxyribonuclease 7 small subunit
FsymDg_3357 DNA polymerase III, alpha subunit
FsymDg_0007 DNA polymerase III, beta subunit
FsymDg_1611 DNA polymerase III, delta subunit
FsymDg_4342 DNA polymerase III, delta prime subunit
FsymDg_3175 DNA polymerase III, epsilon subunit
FsymDg_0598 DNA polymerase III, subunits gamma and tau
FsymDg_3726 single-strand binding protein
FsymDg_1480 single-strand binding protein
FsymDg_0122 single-strand binding protein
FsymDg_4360 single-strand binding protein
FsymDg_4521 single-strand binding protein
FsymDg_4554 single-strand binding protein
FsymDg_2357 DNA adenine methylase
FsymDg_2776 helicase, RecD/TraA family
FsymDg_2268 Exodeoxyribonuclease V
FsymDg_3610 Protein recA
FsymDg_2550 Holliday junction ATP-dependent DNA helicase ruvA
FsymDg_2549 Holliday junction ATP-dependent DNA helicase ruvB
FsymDg_2551 Crossover junction endodeoxyribonuclease ruvC
FsymDg_3308 primosome assembly protein PriA
FsymDg_1537 hypothetical protein
FsymDg_1538 nuclease SbcCD, D subunit
FsymDg_4284 DNA repair protein RadA
FsymDg_0008 DNA replication and repair protein recF
FsymDg_1206 putative transcriptional regulator
FsymDg_0568 putative transcriptional regulator
FsymDg_3694 DEAD/DEAH box helicase domain protein
FsymDg_1629 DNA repair protein recO
FsymDg_0591 Recombination protein recR
FsymDg_3252 DNA repair protein RecN
FsymDg_0902 DNA repair protein
FsymDg_0011 DNA gyrase, A subunit
FsymDg_0010 DNA gyrase, B subunit
FsymDg_4340 DNA topoisomerase I
FsymDg_3705 histone family protein DNA-binding protein
FsymDg_1459 ATP-dependent DNA helicase RecQ
FsymDg_3601 SOS-response transcriptional repressor, LexA
FsymDg_3609 Regulatory protein recX
FsymDg_3612 DEAD/H associated domain protein
FsymDg_3248 NUDIX hydrolase
FsymDg_3598 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
FsymDg_3637 phosphoesterase RecJ domain protein
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K10979 ku; DNA end-binding protein Ku
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4]
K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:fsy03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Candidatus Protofrankia datiscae