KEGG Orthology (KO) - Francisella tularensis subsp. tularensis NE061598

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
     03030 DNA replication [PATH:ftr03030]
     03410 Base excision repair [PATH:ftr03410]
     03420 Nucleotide excision repair [PATH:ftr03420]
     03430 Mismatch repair [PATH:ftr03430]
     03440 Homologous recombination [PATH:ftr03440]
       NE061598_02665 Single-stranded-DNA-specific exonuclease
       NE061598_10195 single-strand binding protein
       NE061598_04375 DNA replication and repair protein RecF
       NE061598_07085 DNA repair protein recO
       NE061598_04635 Recombination protein recR
       NE061598_10185 RecA protein
       NE061598_00630 DNA polymerase I
       NE061598_03770 holliday junction DNA helicase, subunit A
       NE061598_05815 ruvB; Holliday junction DNA helicase B
       NE061598_03755 holliday junction endodeoxyribonuclease
       NE061598_09000 ATP-dependent DNA helicase RecG
       NE061598_07735 Exodeoxyribonuclease V beta chain
       NE061598_07755 Exodeoxyribonuclease V gamma chain
       NE061598_07730 Exodeoxyribonuclease V, alpha subunit
       NE061598_02240 DNA polymerase III alpha subunit
       NE061598_00010 DNA polymerase III, beta subunit
       NE061598_01080 DNA polymerase III, gamma/tau subunits
       NE061598_01115 DNA polymerase III, delta subunit
       NE061598_02570 putative DNA polymerase III, delta prime subunit
       NE061598_03105 DNA polymerase III, epsilon subunit
       NE061598_01680 DNA polymerase III (CHI subunit) protein
       NE061598_01230 primosomal protein N'
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
     03450 Non-homologous end-joining
     03460 Fanconi anemia pathway
 
   09126 Chromosome
 
   09125 Information processing in viruses
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:ftr03000]
     03021 Transcription machinery [BR:ftr03021]
     03019 Messenger RNA biogenesis [BR:ftr03019]
     03041 Spliceosome
     03011 Ribosome [BR:ftr03011]
     03009 Ribosome biogenesis [BR:ftr03009]
     03016 Transfer RNA biogenesis [BR:ftr03016]
     03012 Translation factors [BR:ftr03012]
     03110 Chaperones and folding catalysts [BR:ftr03110]
     04131 Membrane trafficking [BR:ftr04131]
     04121 Ubiquitin system
     03051 Proteasome [BR:ftr03051]
     03032 DNA replication proteins [BR:ftr03032]
     03036 Chromosome and associated proteins [BR:ftr03036]
     03400 DNA repair and recombination proteins [BR:ftr03400]
       NE061598_08485 methylated-DNA--protein-cysteine methyltransferase
       NE061598_04855 deoxyribodipyrimidine photolyase
       NE061598_08845 uracil-DNA glycosylase
       NE061598_03815 Methylpurine-DNA glycosylase family protein
       NE061598_03715 endonuclease III
       NE061598_05645 mutator protein
       NE061598_04710 MutT protein
       NE061598_01785 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
       NE061598_04860 hypothetical protein
       NE061598_03960 formamidopyrimidine-DNA glycosylase
       NE061598_05495 exodeoxyribonuclease III
       NE061598_02665 Single-stranded-DNA-specific exonuclease
       NE061598_07700 DNA ligase, NAD-dependent
       NE061598_00630 DNA polymerase I
       NE061598_09725 DNA excision repair enzyme, subunit A (UvrABC system protein A), ABC transporter, ATP-binding protein
       NE061598_06955 excinuclease ABC subunit B
       NE061598_04470 DNA excision repair enzyme, subunit C (UvrABC system protein A)
       NE061598_00680 DNA helicase II
       NE061598_00825 rpoB; DNA-directed RNA polymerase subunit beta
       NE061598_00830 DNA-directed RNA polymerase, beta' subunit/160 kD subunit
       NE061598_01940 DNA-directed RNA polymerase subunit alpha
       NE061598_08040 DNA-directed RNA polymerase subunit alpha
       NE061598_04010 DNA-directed RNA polymerase, omega subunit
       NE061598_03695 Transcription-repair coupling factor,ATP-dependent
       NE061598_08385 DNA mismatch repair protein
       NE061598_02705 DNA mismatch repair protein
       NE061598_06960 Exodeoxyribonuclease I
       NE061598_06900 xseA; exodeoxyribonuclease VII large subunit
       NE061598_06895 hypothetical protein
       NE061598_02240 DNA polymerase III alpha subunit
       NE061598_00010 DNA polymerase III, beta subunit
       NE061598_01680 DNA polymerase III (CHI subunit) protein
       NE061598_01115 DNA polymerase III, delta subunit
       NE061598_02570 putative DNA polymerase III, delta prime subunit
       NE061598_03105 DNA polymerase III, epsilon subunit
       NE061598_01080 DNA polymerase III, gamma/tau subunits
       NE061598_10195 single-strand binding protein
       NE061598_07735 Exodeoxyribonuclease V beta chain
       NE061598_07755 Exodeoxyribonuclease V gamma chain
       NE061598_07730 Exodeoxyribonuclease V, alpha subunit
       NE061598_10185 RecA protein
       NE061598_03770 holliday junction DNA helicase, subunit A
       NE061598_05815 ruvB; Holliday junction DNA helicase B
       NE061598_03755 holliday junction endodeoxyribonuclease
       NE061598_01230 primosomal protein N'
       NE061598_05015 DNA repair protein RadA
       NE061598_04375 DNA replication and repair protein RecF
       NE061598_09000 ATP-dependent DNA helicase RecG
       NE061598_07085 DNA repair protein recO
       NE061598_04635 Recombination protein recR
       NE061598_05090 DNA repair protein RecN
       NE061598_06250 rdgC; recombination associated protein
       NE061598_08830 DNA gyrase, subunit A
       NE061598_02860 DNA gyrase, B subunit
       NE061598_05195 DNA topoisomerase I
       NE061598_03580 DNA-binding protein HU-beta
       NE061598_07780 prophage repressor protein
       NE061598_10190 regulatory protein RecX
       NE061598_06265 ATP-dependent DNA helicase
       NE061598_03025 ribonucleotide-diphosphate reductase subunit alpha
       NE061598_03015 bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
     03029 Mitochondrial biogenesis [BR:ftr03029]
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: March 26, 2024